Difference between revisions of "TSS:Hg 100578.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000378566.5:0 ENST00000605104.1:0 ENST00000605392.1:0 | + | |all_trans=ENST00000378566.5:0 ENST00000322813.10:0 ENST00000605104.1:0 ENST00000605392.1:0 NM_025182:0 NR_134455:0 AK022837:0 AK021622:0 BC004406:-2 AK307682:-14 LF354331:274 MA589908:274 ENST00000605244.5:-447 LF206429:-483 MA442006:-483 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-5 |
|end=35115894 | |end=35115894 | ||
|end_of_center_position=35115867 | |end_of_center_position=35115867 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_025182 | |nearest_refseq=NM_025182 | ||
|nearest_unigene=Hs.301696 | |nearest_unigene=Hs.301696 | ||
| − | |num_trans= | + | |num_trans=15 |
|species=human | |species=human | ||
|start=35115839 | |start=35115839 | ||
|start_of_center_position=35115866 | |start_of_center_position=35115866 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000378566.5 ENST00000605104.1 ENST00000605392.1 | + | |transcript_name=ENST00000378566.5 ENST00000322813.10 ENST00000605104.1 ENST00000605392.1 NM_025182 NR_134455 AK022837 AK021622 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100578.1 | |tss_id=hg_100578.1 | ||
Revision as of 15:23, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 35115866 |
|---|---|
| End of the center position in the TSS region: | 35115867 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000378566.5 ENST00000322813.10 ENST00000605104.1 ENST00000605392.1 NM_025182 NR_134455 AK022837 AK021622 |
|---|---|
| Distance: | 0 |
| Num_trans: | 15 |
| All_trans: | ENST00000378566.5:0 ENST00000322813.10:0 ENST00000605104.1:0 ENST00000605392.1:0 NM_025182:0 NR_134455:0 AK022837:0 AK021622:0 BC004406:-2 AK307682:-14 LF354331:274 MA589908:274 ENST00000605244.5:-447 LF206429:-483 MA442006:-483 |
TATA-Box annotation
| Distance to TSS: | -5 |
|---|---|
| Nearest PromoterID: | NM_025182 |
| Entrez ID: | 80256 |
| Nearest Unigene: | Hs.301696 |
| Nearest Refseq: | NM_025182 |
| Nearest Ensembl: | ENSG00000005238 |
| Gene Name: | family with sequence similarity 214 member B |
| Gene Alias: | KIAA1539 |
| Gene Description: | family with sequence similarity 214 member B |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
