Difference between revisions of "TSS:Hg 100579.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=AK307682:0 BC004406:10 AK021622:28 ENST00000322813.10:44 ENST00000605104.1:44 ENST00000605392.1:44 NM_025182:44 NR_134455:44 ENST00000378566.5:56 AK022837:56 LF354331:340 MA589908:340 ENST00000605244.5:-425 LF206429:-461 MA442006:-461 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-49 |
|end=35115916 | |end=35115916 | ||
|end_of_center_position=35115911 | |end_of_center_position=35115911 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_025182 | |nearest_refseq=NM_025182 | ||
|nearest_unigene=Hs.301696 | |nearest_unigene=Hs.301696 | ||
| − | |num_trans= | + | |num_trans=15 |
|species=human | |species=human | ||
|start=35115905 | |start=35115905 | ||
|start_of_center_position=35115910 | |start_of_center_position=35115910 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AK307682 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100579.1 | |tss_id=hg_100579.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 15:23, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 35115910 |
|---|---|
| End of the center position in the TSS region: | 35115911 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK307682 |
|---|---|
| Distance: | 0 |
| Num_trans: | 15 |
| All_trans: | AK307682:0 BC004406:10 AK021622:28 ENST00000322813.10:44 ENST00000605104.1:44 ENST00000605392.1:44 NM_025182:44 NR_134455:44 ENST00000378566.5:56 AK022837:56 LF354331:340 MA589908:340 ENST00000605244.5:-425 LF206429:-461 MA442006:-461 |
TATA-Box annotation
| Distance to TSS: | -49 |
|---|---|
| Nearest PromoterID: | NM_025182 |
| Entrez ID: | 80256 |
| Nearest Unigene: | Hs.301696 |
| Nearest Refseq: | NM_025182 |
| Nearest Ensembl: | ENSG00000005238 |
| Gene Name: | family with sequence similarity 214 member B |
| Gene Alias: | KIAA1539 |
| Gene Description: | family with sequence similarity 214 member B |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
