Difference between revisions of "TSS:Hg 100582.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=KJ896345:-277 ENST00000492890.5:-321 | + | |all_trans=KJ896345:-277 ENST00000492890.5:-321 ENST00000399742.7:-325 NM_001099951:-325 NM_001164310:-325 NM_001287239:-325 NM_001287238:-325 ENST00000619051.4:-346 ENST00000447837.1:-346 BC146928:-346 BC146933:-346 BC171840:-346 BC171851:-346 BC129999:-346 ENST00000480287.1:498 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=-277 | |distance=-277 | ||
| − | |distance_to_tss= | + | |distance_to_tss=329 |
|end=35563553 | |end=35563553 | ||
| + | |end_of_center_position=35563549 | ||
|entrez_id=730112 | |entrez_id=730112 | ||
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
| Line 13: | Line 14: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000215187 | |nearest_ensembl=ENSG00000215187 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001164310 |
|nearest_refseq=NM_001099951 | |nearest_refseq=NM_001099951 | ||
|nearest_unigene=Hs.98959 | |nearest_unigene=Hs.98959 | ||
| − | |num_trans= | + | |num_trans=15 |
|species=human | |species=human | ||
|start=35563544 | |start=35563544 | ||
| + | |start_of_center_position=35563548 | ||
|strand=- | |strand=- | ||
|transcript_name=KJ896345 | |transcript_name=KJ896345 | ||
Latest revision as of 15:23, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 35563548 |
|---|---|
| End of the center position in the TSS region: | 35563549 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | KJ896345 |
|---|---|
| Distance: | -277 |
| Num_trans: | 15 |
| All_trans: | KJ896345:-277 ENST00000492890.5:-321 ENST00000399742.7:-325 NM_001099951:-325 NM_001164310:-325 NM_001287239:-325 NM_001287238:-325 ENST00000619051.4:-346 ENST00000447837.1:-346 BC146928:-346 BC146933:-346 BC171840:-346 BC171851:-346 BC129999:-346 ENST00000480287.1:498 |
TATA-Box annotation
| Distance to TSS: | 329 |
|---|---|
| Nearest PromoterID: | NM_001164310 |
| Entrez ID: | 730112 |
| Nearest Unigene: | Hs.98959 |
| Nearest Refseq: | NM_001099951 |
| Nearest Ensembl: | ENSG00000215187 |
| Gene Name: | FAM166B |
| Gene Alias: | - |
| Gene Description: | family with sequence similarity 166 member B |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
