Difference between revisions of "TSS:Hg 100583.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000492890.5:-18 | + | |all_trans=ENST00000492890.5:-18 ENST00000399742.7:-22 NM_001099951:-22 NM_001164310:-22 NM_001287239:-22 NM_001287238:-22 KJ896345:22 ENST00000619051.4:-43 ENST00000447837.1:-43 BC146928:-43 BC146933:-43 BC171840:-43 BC171851:-43 BC129999:-43 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=-18 | |distance=-18 | ||
| − | |distance_to_tss= | + | |distance_to_tss=24 |
|end=35563856 | |end=35563856 | ||
|end_of_center_position=35563854 | |end_of_center_position=35563854 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:34242 | |hgnc_mgi_id=HGNC:34242 | ||
|nearest_ensembl=ENSG00000215187 | |nearest_ensembl=ENSG00000215187 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001164310 |
|nearest_refseq=NM_001099951 | |nearest_refseq=NM_001099951 | ||
|nearest_unigene=Hs.98959 | |nearest_unigene=Hs.98959 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=human | |species=human | ||
|start=35563851 | |start=35563851 | ||
|start_of_center_position=35563853 | |start_of_center_position=35563853 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000492890.5 | + | |transcript_name=ENST00000492890.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100583.1 | |tss_id=hg_100583.1 | ||
Revision as of 15:23, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 35563853 |
|---|---|
| End of the center position in the TSS region: | 35563854 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000492890.5 |
|---|---|
| Distance: | -18 |
| Num_trans: | 14 |
| All_trans: | ENST00000492890.5:-18 ENST00000399742.7:-22 NM_001099951:-22 NM_001164310:-22 NM_001287239:-22 NM_001287238:-22 KJ896345:22 ENST00000619051.4:-43 ENST00000447837.1:-43 BC146928:-43 BC146933:-43 BC171840:-43 BC171851:-43 BC129999:-43 |
TATA-Box annotation
| Distance to TSS: | 24 |
|---|---|
| Nearest PromoterID: | NM_001164310 |
| Entrez ID: | 730112 |
| Nearest Unigene: | Hs.98959 |
| Nearest Refseq: | NM_001099951 |
| Nearest Ensembl: | ENSG00000215187 |
| Gene Name: | family with sequence similarity 166 member B |
| Gene Alias: | - |
| Gene Description: | family with sequence similarity 166 member B |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
