Difference between revisions of "TSS:Hg 100588.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|LYB2= | |LYB2= | ||
| − | |all_trans=ENST00000490239.5:0 ENST00000378431.5:0 ENST00000482121.1:0 ENST00000378430.3:0 | + | |all_trans=ENST00000259633.9:0 ENST00000490239.5:0 ENST00000378431.5:0 ENST00000482121.1:0 ENST00000378430.3:0 NM_001782:0 M54992:0 BC030227:0 AF283777:0 AK310685:0 AK310093:0 AK307305:0 AK309268:0 ENST00000477364.5:13 ENST00000463720.5:15 BC011734:19 KJ890871:64 CU688854:64 AB209587:-338 ENST00000612238.4:-393 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=20 |
|end=35618418 | |end=35618418 | ||
|end_of_center_position=35618393 | |end_of_center_position=35618393 | ||
|entrez_id=971 | |entrez_id=971 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
| − | |gene_alias=CD72b | + | |gene_alias=CD72b|LYB2 |
|gene_description=CD72 molecule | |gene_description=CD72 molecule | ||
|gene_id=971 | |gene_id=971 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_001782 | |nearest_refseq=NM_001782 | ||
|nearest_unigene=Hs.116481 | |nearest_unigene=Hs.116481 | ||
| − | |num_trans= | + | |num_trans=20 |
|species=human | |species=human | ||
|start=35618367 | |start=35618367 | ||
|start_of_center_position=35618392 | |start_of_center_position=35618392 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000490239.5 ENST00000378431.5 ENST00000482121.1 ENST00000378430.3 | + | |transcript_name=ENST00000259633.9 ENST00000490239.5 ENST00000378431.5 ENST00000482121.1 ENST00000378430.3 NM_001782 M54992 BC030227 AF283777 AK310685 AK310093 AK307305 AK309268 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100588.1 | |tss_id=hg_100588.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q5T4Q7 Q5T4Q8 | + | |uniprot_id=Q5T4Q7 Q5T4Q8 Q5TLG3 |
}} | }} | ||
Revision as of 15:23, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 35618392 |
|---|---|
| End of the center position in the TSS region: | 35618393 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000259633.9 ENST00000490239.5 ENST00000378431.5 ENST00000482121.1 ENST00000378430.3 NM_001782 M54992 BC030227 AF283777 AK310685 AK310093 AK307305 AK309268 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | ENST00000259633.9:0 ENST00000490239.5:0 ENST00000378431.5:0 ENST00000482121.1:0 ENST00000378430.3:0 NM_001782:0 M54992:0 BC030227:0 AF283777:0 AK310685:0 AK310093:0 AK307305:0 AK309268:0 ENST00000477364.5:13 ENST00000463720.5:15 BC011734:19 KJ890871:64 CU688854:64 AB209587:-338 ENST00000612238.4:-393 |
TATA-Box annotation
| Distance to TSS: | 20 |
|---|---|
| Nearest PromoterID: | NM_001782 |
| Entrez ID: | 971 |
| Nearest Unigene: | Hs.116481 |
| Nearest Refseq: | NM_001782 |
| Nearest Ensembl: | ENSG00000137101 |
| Gene Name: | CD72 molecule |
| Gene Alias: | CD72b |
| Gene Description: | CD72 molecule |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
