Difference between revisions of "TSS:Hg 10066.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AL833841:1 BC008772:-7 HQ447595:-9 KJ899180:-9 KJ902869:-9 CU675235:-9 CU680804:-9 ENST00000426784 | + | |all_trans=AL833841:1 BC008772:-7 HQ447595:-9 KJ899180:-9 KJ902869:-9 CU675235:-9 CU680804:-9 ENST00000426784.1:-11 BC006086:-11 AK294539:-12 ENST00000485073.5:-13 AF306694:-13 AK001599:-22 BC014145:-23 ENST00000377577.10:-25 NM_018198:-25 AY336749:-25 ENST00000465911.1:-28 AF306695:-28 ENST00000473993.5:-31 ENST00000460594.5:-32 ENST00000294401.11:-133 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
|distance=1 | |distance=1 | ||
| − | |distance_to_tss= | + | |distance_to_tss=30 |
|end=6701791 | |end=6701791 | ||
|end_of_center_position=6701786 | |end_of_center_position=6701786 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_018198 | |nearest_refseq=NM_018198 | ||
|nearest_unigene=Hs.462640 | |nearest_unigene=Hs.462640 | ||
| − | |num_trans= | + | |num_trans=22 |
|species=human | |species=human | ||
|start=6701780 | |start=6701780 | ||
Revision as of 15:25, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 6701785 |
|---|---|
| End of the center position in the TSS region: | 6701786 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AL833841 |
|---|---|
| Distance: | 1 |
| Num_trans: | 22 |
| All_trans: | AL833841:1 BC008772:-7 HQ447595:-9 KJ899180:-9 KJ902869:-9 CU675235:-9 CU680804:-9 ENST00000426784.1:-11 BC006086:-11 AK294539:-12 ENST00000485073.5:-13 AF306694:-13 AK001599:-22 BC014145:-23 ENST00000377577.10:-25 NM_018198:-25 AY336749:-25 ENST00000465911.1:-28 AF306695:-28 ENST00000473993.5:-31 ENST00000460594.5:-32 ENST00000294401.11:-133 |
TATA-Box annotation
| Distance to TSS: | 30 |
|---|---|
| Nearest PromoterID: | NM_018198 |
| Entrez ID: | 55735 |
| Nearest Unigene: | Hs.462640 |
| Nearest Refseq: | NM_018198 |
| Nearest Ensembl: | ENSG00000007923 |
| Gene Name: | DnaJ heat shock protein family (Hsp40) member C11 |
| Gene Alias: | dJ126A5.1 |
| Gene Description: | DnaJ heat shock protein family (Hsp40) member C11 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
