Difference between revisions of "TSS:Hg 100688.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000259605.11:0 NM_022781:0 NM_194329:0 ENST00000353739.8:-24 ENST00000611646.4:-24 BC033786:-24 AL136817:45 AK097653:-347 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=1 |
|end=36400275 | |end=36400275 | ||
|end_of_center_position=36400268 | |end_of_center_position=36400268 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_022781 | |nearest_refseq=NM_022781 | ||
|nearest_unigene=Hs.333503 | |nearest_unigene=Hs.333503 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=36400260 | |start=36400260 | ||
|start_of_center_position=36400267 | |start_of_center_position=36400267 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000259605.11 NM_022781 NM_194329 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100688.1 | |tss_id=hg_100688.1 | ||
Revision as of 15:25, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 36400267 |
|---|---|
| End of the center position in the TSS region: | 36400268 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000259605.11 NM_022781 NM_194329 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | ENST00000259605.11:0 NM_022781:0 NM_194329:0 ENST00000353739.8:-24 ENST00000611646.4:-24 BC033786:-24 AL136817:45 AK097653:-347 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_022781 |
| Entrez ID: | 152006 |
| Nearest Unigene: | Hs.333503 |
| Nearest Refseq: | NM_022781 |
| Nearest Ensembl: | ENSG00000137075 |
| Gene Name: | ring finger protein 38 |
| Gene Alias: | - |
| Gene Description: | ring finger protein 38 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
