Difference between revisions of "TSS:Hg 100699.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000488058 | + | |all_trans=ENST00000488058.1:140 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.17 | |cpg_percent=0.17 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:18052 | |hgnc_mgi_id=HGNC:18052 | ||
|nearest_ensembl=ENSG00000165304 | |nearest_ensembl=ENSG00000165304 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001256689 |
|nearest_refseq=NM_014791 | |nearest_refseq=NM_014791 | ||
|nearest_unigene=Hs.184339 | |nearest_unigene=Hs.184339 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=36487687 | |start=36487687 | ||
|start_of_center_position=36487692 | |start_of_center_position=36487692 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000488058 | + | |transcript_name=ENST00000488058.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100699.1 | |tss_id=hg_100699.1 | ||
Revision as of 15:26, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 36487692 |
|---|---|
| End of the center position in the TSS region: | 36487693 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000488058.1 |
|---|---|
| Distance: | 140 |
| Num_trans: | 1 |
| All_trans: | ENST00000488058.1:140 |
TATA-Box annotation
| Distance to TSS: | -85169 |
|---|---|
| Nearest PromoterID: | NM_001256689 |
| Entrez ID: | 9833 |
| Nearest Unigene: | Hs.184339 |
| Nearest Refseq: | NM_014791 |
| Nearest Ensembl: | ENSG00000165304 |
| Gene Name: | ring finger protein 38 |
| Gene Alias: | HPK38 |
| Gene Description: | maternal embryonic leucine zipper kinase |
| Gene Type: | protein-coding |
| CpG%: | 0.17 |
| GC%: | 0.840796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
