Difference between revisions of "TSS:Hg 10071.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=168674 |entrez_id=23261 |gc_percent=0.621891 |gene_alias=CANPMR |gene_description=calmodulin binding transcription activator 1...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr1 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=168544 | ||
| + | |end=6953999 | ||
| + | |end_of_center_position=6953999 | ||
|entrez_id=23261 | |entrez_id=23261 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
| Line 9: | Line 13: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000171735 | |nearest_ensembl=ENSG00000171735 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001349609 |
|nearest_refseq=NM_015215 | |nearest_refseq=NM_015215 | ||
|nearest_unigene=Hs.397705 | |nearest_unigene=Hs.397705 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=6953997 | ||
| + | |start_of_center_position=6953998 | ||
| + | |strand=- | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_10071.1 | |tss_id=hg_10071.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 15:26, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6953998 |
|---|---|
| End of the center position in the TSS region: | 6953999 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 168544 |
|---|---|
| Nearest PromoterID: | NM_001349609 |
| Entrez ID: | 23261 |
| Nearest Unigene: | Hs.397705 |
| Nearest Refseq: | NM_015215 |
| Nearest Ensembl: | ENSG00000171735 |
| Gene Name: | CAMTA1 |
| Gene Alias: | CANPMR |
| Gene Description: | calmodulin binding transcription activator 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
