Difference between revisions of "TSS:Hg 100823.1"
From referenceTSS
| Line 5: | Line 5: | ||
|X11A= | |X11A= | ||
|X11ALPHA= | |X11ALPHA= | ||
| − | |all_trans= | + | |all_trans=ENST00000265381.7:0 NM_001163:0 AF047347:35 AF029106:60 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=5 |
|end=69672392 | |end=69672392 | ||
|end_of_center_position=69672367 | |end_of_center_position=69672367 | ||
|entrez_id=320 | |entrez_id=320 | ||
|gc_percent=0.800995 | |gc_percent=0.800995 | ||
| − | |gene_alias=D9S411E | + | |gene_alias=D9S411E|LIN10|MINT1|X11|X11A|X11ALPHA |
|gene_description=amyloid beta precursor protein binding family A member 1 | |gene_description=amyloid beta precursor protein binding family A member 1 | ||
|gene_id=320 | |gene_id=320 | ||
| Line 27: | Line 27: | ||
|nearest_refseq=NM_001163 | |nearest_refseq=NM_001163 | ||
|nearest_unigene=Hs.171939 | |nearest_unigene=Hs.171939 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=69672340 | |start=69672340 | ||
|start_of_center_position=69672366 | |start_of_center_position=69672366 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NM_001163 | + | |transcript_name=ENST00000265381.7 NM_001163 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100823.1 | |tss_id=hg_100823.1 | ||
Revision as of 15:28, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 69672366 |
|---|---|
| End of the center position in the TSS region: | 69672367 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000265381.7 NM_001163 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | ENST00000265381.7:0 NM_001163:0 AF047347:35 AF029106:60 |
TATA-Box annotation
| Distance to TSS: | 5 |
|---|---|
| Nearest PromoterID: | NM_001163 |
| Entrez ID: | 320 |
| Nearest Unigene: | Hs.171939 |
| Nearest Refseq: | NM_001163 |
| Nearest Ensembl: | ENSG00000107282 |
| Gene Name: | amyloid beta precursor protein binding family A member 1 |
| Gene Alias: | D9S411E |
| Gene Description: | amyloid beta precursor protein binding family A member 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.800995 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
