Difference between revisions of "TSS:Hg 10083.1"
From referenceTSS
| Line 4: | Line 4: | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=-7526 | |distance_to_tss=-7526 | ||
|end=7954150 | |end=7954150 | ||
| Line 10: | Line 10: | ||
|entrez_id=11315 | |entrez_id=11315 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
| − | |gene_alias=DJ-1 | + | |gene_alias=DJ-1|DJ1|GATD2|HEL-S-67p |
|gene_description=Parkinsonism associated deglycase | |gene_description=Parkinsonism associated deglycase | ||
|gene_name=PARK7 | |gene_name=PARK7 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000116288 | |nearest_ensembl=ENSG00000116288 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001123377 |
|nearest_refseq=NM_007262 | |nearest_refseq=NM_007262 | ||
|nearest_unigene=Hs.419640 | |nearest_unigene=Hs.419640 | ||
| Line 23: | Line 23: | ||
|start_of_center_position=7954127 | |start_of_center_position=7954127 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=11(TCCTTTAGAGCG,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=yes | |tss_classification=yes | ||
Revision as of 15:29, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 7954127 |
|---|---|
| End of the center position in the TSS region: | 7954128 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -7526 |
|---|---|
| Nearest PromoterID: | NM_001123377 |
| Entrez ID: | 11315 |
| Nearest Unigene: | Hs.419640 |
| Nearest Refseq: | NM_007262 |
| Nearest Ensembl: | ENSG00000116288 |
| Gene Name: | PARK7 |
| Gene Alias: | DJ-1 |
| Gene Description: | Parkinsonism associated deglycase |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 11(TCCTTTAGAGCG,+,0.00) |
