Difference between revisions of "TSS:Hg 100832.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=575 |entrez_id=138255 |gc_percent=0.532338 |gene_alias=- |gene_description=chromosome 9 open reading frame 135 |gene_name=C9orf...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=563 | ||
| + | |end=69821386 | ||
| + | |end_of_center_position=69821381 | ||
|entrez_id=138255 | |entrez_id=138255 | ||
|gc_percent=0.532338 | |gc_percent=0.532338 | ||
| Line 9: | Line 13: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000204711 | |nearest_ensembl=ENSG00000204711 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001010940 |
|nearest_refseq=NM_001010940 | |nearest_refseq=NM_001010940 | ||
|nearest_unigene=Hs.444459 | |nearest_unigene=Hs.444459 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=69821374 | ||
| + | |start_of_center_position=69821380 | ||
| + | |strand=- | ||
| + | |tata_box=-73(CTATTTATACAC,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_100832.1 | |tss_id=hg_100832.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 15:29, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 69821380 |
|---|---|
| End of the center position in the TSS region: | 69821381 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 563 |
|---|---|
| Nearest PromoterID: | NM_001010940 |
| Entrez ID: | 138255 |
| Nearest Unigene: | Hs.444459 |
| Nearest Refseq: | NM_001010940 |
| Nearest Ensembl: | ENSG00000204711 |
| Gene Name: | C9orf135 |
| Gene Alias: | - |
| Gene Description: | chromosome 9 open reading frame 135 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -73(CTATTTATACAC,+,0.00) |
