Difference between revisions of "TSS:Hg 100847.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|BTEB1= | |BTEB1= | ||
| − | |all_trans=BC069431:95 AK313631:95 BC074879:120 BC074880:120 EU446889:165 AB464604:167 CU686806:168 AB451404:169 | + | |all_trans=LF345228:83 MA580805:83 BC069431:95 AK313631:95 BC074879:120 BC074880:120 EU446889:165 AB464604:167 CU686806:168 AB451404:169 LF213686:221 MA449263:221 LF345227:-229 MA580804:-229 LF345226:-465 MA580803:-465 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.19 | |cpg_percent=0.19 | ||
| − | |distance= | + | |distance=83 |
|distance_to_tss=1120 | |distance_to_tss=1120 | ||
|end=70413542 | |end=70413542 | ||
| Line 10: | Line 10: | ||
|entrez_id=687 | |entrez_id=687 | ||
|gc_percent=0.800995 | |gc_percent=0.800995 | ||
| − | |gene_alias=BTEB | + | |gene_alias=BTEB|BTEB1 |
|gene_description=Kruppel like factor 9 | |gene_description=Kruppel like factor 9 | ||
|gene_id=687 | |gene_id=687 | ||
| − | |gene_name= | + | |gene_name=KLF9 |
|gene_source=HGNC:1123 | |gene_source=HGNC:1123 | ||
|gene_symbol=KLF9 | |gene_symbol=KLF9 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_001206 | |nearest_refseq=NM_001206 | ||
|nearest_unigene=Hs.150557 | |nearest_unigene=Hs.150557 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=70413531 | |start=70413531 | ||
|start_of_center_position=70413536 | |start_of_center_position=70413536 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF345228 MA580805 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100847.1 | |tss_id=hg_100847.1 | ||
Revision as of 15:29, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 70413536 |
|---|---|
| End of the center position in the TSS region: | 70413537 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF345228 MA580805 |
|---|---|
| Distance: | 83 |
| Num_trans: | 16 |
| All_trans: | LF345228:83 MA580805:83 BC069431:95 AK313631:95 BC074879:120 BC074880:120 EU446889:165 AB464604:167 CU686806:168 AB451404:169 LF213686:221 MA449263:221 LF345227:-229 MA580804:-229 LF345226:-465 MA580803:-465 |
TATA-Box annotation
| Distance to TSS: | 1120 |
|---|---|
| Nearest PromoterID: | NM_001206 |
| Entrez ID: | 687 |
| Nearest Unigene: | Hs.150557 |
| Nearest Refseq: | NM_001206 |
| Nearest Ensembl: | ENSG00000119138 |
| Gene Name: | KLF9 |
| Gene Alias: | BTEB |
| Gene Description: | Kruppel like factor 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.19 |
| GC%: | 0.800995 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
