Difference between revisions of "TSS:Hg 100848.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|BTEB1= | |BTEB1= | ||
| − | |all_trans=BC069431:110 AK313631:110 BC074879:135 BC074880:135 EU446889:180 AB464604:182 CU686806:183 AB451404:184 | + | |all_trans=LF345228:98 MA580805:98 BC069431:110 AK313631:110 BC074879:135 BC074880:135 EU446889:180 AB464604:182 CU686806:183 AB451404:184 LF345227:-196 MA580804:-196 LF213686:236 MA449263:236 LF345226:-432 MA580803:-432 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.19 | |cpg_percent=0.19 | ||
| − | |distance= | + | |distance=98 |
|distance_to_tss=1096 | |distance_to_tss=1096 | ||
|end=70413575 | |end=70413575 | ||
| Line 10: | Line 10: | ||
|entrez_id=687 | |entrez_id=687 | ||
|gc_percent=0.810945 | |gc_percent=0.810945 | ||
| − | |gene_alias=BTEB | + | |gene_alias=BTEB|BTEB1 |
|gene_description=Kruppel like factor 9 | |gene_description=Kruppel like factor 9 | ||
|gene_id=687 | |gene_id=687 | ||
| − | |gene_name= | + | |gene_name=KLF9 |
|gene_source=HGNC:1123 | |gene_source=HGNC:1123 | ||
|gene_symbol=KLF9 | |gene_symbol=KLF9 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_001206 | |nearest_refseq=NM_001206 | ||
|nearest_unigene=Hs.150557 | |nearest_unigene=Hs.150557 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=70413546 | |start=70413546 | ||
|start_of_center_position=70413560 | |start_of_center_position=70413560 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF345228 MA580805 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100848.1 | |tss_id=hg_100848.1 | ||
Revision as of 15:29, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 70413560 |
|---|---|
| End of the center position in the TSS region: | 70413561 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF345228 MA580805 |
|---|---|
| Distance: | 98 |
| Num_trans: | 16 |
| All_trans: | LF345228:98 MA580805:98 BC069431:110 AK313631:110 BC074879:135 BC074880:135 EU446889:180 AB464604:182 CU686806:183 AB451404:184 LF345227:-196 MA580804:-196 LF213686:236 MA449263:236 LF345226:-432 MA580803:-432 |
TATA-Box annotation
| Distance to TSS: | 1096 |
|---|---|
| Nearest PromoterID: | NM_001206 |
| Entrez ID: | 687 |
| Nearest Unigene: | Hs.150557 |
| Nearest Refseq: | NM_001206 |
| Nearest Ensembl: | ENSG00000119138 |
| Gene Name: | KLF9 |
| Gene Alias: | BTEB |
| Gene Description: | Kruppel like factor 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.19 |
| GC%: | 0.810945 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
