Difference between revisions of "TSS:Hg 100856.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|BTEB1= | |BTEB1= | ||
| − | |all_trans=ENST00000377126.3 | + | |all_trans=LF345226:122 MA580803:122 LF345227:358 MA580804:358 ENST00000377126.3:-484 D31716:-484 S72504:-484 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| − | |distance= | + | |distance=122 |
|distance_to_tss=523 | |distance_to_tss=523 | ||
|end=70414140 | |end=70414140 | ||
| Line 10: | Line 10: | ||
|entrez_id=687 | |entrez_id=687 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
| − | |gene_alias=BTEB | + | |gene_alias=BTEB|BTEB1 |
|gene_description=Kruppel like factor 9 | |gene_description=Kruppel like factor 9 | ||
|gene_id=687 | |gene_id=687 | ||
| − | |gene_name= | + | |gene_name=KLF9 |
|gene_source=HGNC:1123 | |gene_source=HGNC:1123 | ||
|gene_symbol=KLF9 | |gene_symbol=KLF9 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_001206 | |nearest_refseq=NM_001206 | ||
|nearest_unigene=Hs.150557 | |nearest_unigene=Hs.150557 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=70414128 | |start=70414128 | ||
|start_of_center_position=70414134 | |start_of_center_position=70414134 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-35(CCTTTTAAATGT,+,0.00) |
| − | |transcript_name= | + | |transcript_name=LF345226 MA580803 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_100856.1 | |tss_id=hg_100856.1 | ||
Revision as of 15:29, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 70414134 |
|---|---|
| End of the center position in the TSS region: | 70414135 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF345226 MA580803 |
|---|---|
| Distance: | 122 |
| Num_trans: | 7 |
| All_trans: | LF345226:122 MA580803:122 LF345227:358 MA580804:358 ENST00000377126.3:-484 D31716:-484 S72504:-484 |
TATA-Box annotation
| Distance to TSS: | 523 |
|---|---|
| Nearest PromoterID: | NM_001206 |
| Entrez ID: | 687 |
| Nearest Unigene: | Hs.150557 |
| Nearest Refseq: | NM_001206 |
| Nearest Ensembl: | ENSG00000119138 |
| Gene Name: | KLF9 |
| Gene Alias: | BTEB |
| Gene Description: | Kruppel like factor 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -35(CCTTTTAAATGT,+,0.00) |
