Difference between revisions of "TSS:Hg 100919.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=49042 |entrez_id=23670 |gc_percent=0.368159 |gene_alias=- |gene_description=transmembrane protein 2 |gene_name=TMEM2 |gene_type=...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=LF345193:322 MA580770:322 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance_to_tss= | + | |distance=322 |
| + | |distance_to_tss=48671 | ||
| + | |end=71719843 | ||
| + | |end_of_center_position=71719842 | ||
|entrez_id=23670 | |entrez_id=23670 | ||
|gc_percent=0.368159 | |gc_percent=0.368159 | ||
| − | |gene_alias= | + | |gene_alias=TMEM2 |
| − | |gene_description= | + | |gene_description=cell migration inducing hyaluronidase 2 |
| − | |gene_name= | + | |gene_name=CEMIP2 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000135048 | |nearest_ensembl=ENSG00000135048 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_013390 | |nearest_refseq=NM_013390 | ||
|nearest_unigene=Hs.494146 | |nearest_unigene=Hs.494146 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=71719840 | ||
| + | |start_of_center_position=71719841 | ||
| + | |strand=- | ||
| + | |transcript_name=LF345193 MA580770 | ||
| + | |tss_classification=no | ||
|tss_id=hg_100919.1 | |tss_id=hg_100919.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 15:31, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 71719841 |
|---|---|
| End of the center position in the TSS region: | 71719842 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | LF345193 MA580770 |
|---|---|
| Distance: | 322 |
| Num_trans: | 2 |
| All_trans: | LF345193:322 MA580770:322 |
TATA-Box annotation
| Distance to TSS: | 48671 |
|---|---|
| Nearest PromoterID: | NM_001135820 |
| Entrez ID: | 23670 |
| Nearest Unigene: | Hs.494146 |
| Nearest Refseq: | NM_013390 |
| Nearest Ensembl: | ENSG00000135048 |
| Gene Name: | CEMIP2 |
| Gene Alias: | TMEM2 |
| Gene Description: | cell migration inducing hyaluronidase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.368159 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
