Difference between revisions of "TSS:Hg 100925.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=16317 |entrez_id=23670 |gc_percent=0.462687 |gene_alias=- |gene_description=transmembrane protein 2 |gene_name=TMEM2 |gene_type=pro...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=LF345180:-148 MA580757:-148 LF345181:259 MA580758:259 | ||
| + | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance_to_tss= | + | |distance=-148 |
| + | |distance_to_tss=15946 | ||
| + | |end=71752574 | ||
| + | |end_of_center_position=71752567 | ||
|entrez_id=23670 | |entrez_id=23670 | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
| − | |gene_alias= | + | |gene_alias=TMEM2 |
| − | |gene_description= | + | |gene_description=cell migration inducing hyaluronidase 2 |
| − | |gene_name= | + | |gene_name=CEMIP2 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000135048 | |nearest_ensembl=ENSG00000135048 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_013390 | |nearest_refseq=NM_013390 | ||
|nearest_unigene=Hs.494146 | |nearest_unigene=Hs.494146 | ||
| + | |num_trans=4 | ||
| + | |species=human | ||
| + | |start=71752559 | ||
| + | |start_of_center_position=71752566 | ||
| + | |strand=- | ||
| + | |transcript_name=LF345180 MA580757 | ||
| + | |tss_classification=no | ||
|tss_id=hg_100925.1 | |tss_id=hg_100925.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 15:31, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 71752566 |
|---|---|
| End of the center position in the TSS region: | 71752567 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF345180 MA580757 |
|---|---|
| Distance: | -148 |
| Num_trans: | 4 |
| All_trans: | LF345180:-148 MA580757:-148 LF345181:259 MA580758:259 |
TATA-Box annotation
| Distance to TSS: | 15946 |
|---|---|
| Nearest PromoterID: | NM_001135820 |
| Entrez ID: | 23670 |
| Nearest Unigene: | Hs.494146 |
| Nearest Refseq: | NM_013390 |
| Nearest Ensembl: | ENSG00000135048 |
| Gene Name: | CEMIP2 |
| Gene Alias: | TMEM2 |
| Gene Description: | cell migration inducing hyaluronidase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
