Difference between revisions of "TSS:Hg 100933.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000377044. | + | |all_trans=AK056807:308 ENST00000377044.9:342 ENST00000543165.1:342 NM_001349784:342 NM_013390:342 NM_001135820:342 AK300405:342 AF137030:363 AB037833:378 BC146780:378 ENST00000377066.9:469 ENST00000542935.5:469 BC140773:469 BC144510:469 BC171782:469 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| − | |distance= | + | |distance=308 |
| − | |distance_to_tss= | + | |distance_to_tss=-354 |
|end=71768879 | |end=71768879 | ||
|end_of_center_position=71768867 | |end_of_center_position=71768867 | ||
|entrez_id=23670 | |entrez_id=23670 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
| − | |gene_alias= | + | |gene_alias=TMEM2 |
| − | |gene_description= | + | |gene_description=cell migration inducing hyaluronidase 2 |
|gene_id=23670 | |gene_id=23670 | ||
| − | |gene_name= | + | |gene_name=CEMIP2 |
|gene_source=HGNC:11869 | |gene_source=HGNC:11869 | ||
|gene_symbol=TMEM2 | |gene_symbol=TMEM2 | ||
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|hgnc_mgi_id=HGNC:11869 | |hgnc_mgi_id=HGNC:11869 | ||
|nearest_ensembl=ENSG00000135048 | |nearest_ensembl=ENSG00000135048 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_013390 |
|nearest_refseq=NM_013390 | |nearest_refseq=NM_013390 | ||
|nearest_unigene=Hs.494146 | |nearest_unigene=Hs.494146 | ||
| − | |num_trans= | + | |num_trans=15 |
|species=human | |species=human | ||
|start=71768854 | |start=71768854 | ||
|start_of_center_position=71768866 | |start_of_center_position=71768866 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AK056807 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100933.1 | |tss_id=hg_100933.1 | ||
Latest revision as of 15:31, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 71768866 |
|---|---|
| End of the center position in the TSS region: | 71768867 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK056807 |
|---|---|
| Distance: | 308 |
| Num_trans: | 15 |
| All_trans: | AK056807:308 ENST00000377044.9:342 ENST00000543165.1:342 NM_001349784:342 NM_013390:342 NM_001135820:342 AK300405:342 AF137030:363 AB037833:378 BC146780:378 ENST00000377066.9:469 ENST00000542935.5:469 BC140773:469 BC144510:469 BC171782:469 |
TATA-Box annotation
| Distance to TSS: | -354 |
|---|---|
| Nearest PromoterID: | NM_013390 |
| Entrez ID: | 23670 |
| Nearest Unigene: | Hs.494146 |
| Nearest Refseq: | NM_013390 |
| Nearest Ensembl: | ENSG00000135048 |
| Gene Name: | CEMIP2 |
| Gene Alias: | TMEM2 |
| Gene Description: | cell migration inducing hyaluronidase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
