Difference between revisions of "TSS:Hg 100954.1"
From referenceTSS
| Line 2: | Line 2: | ||
|ZFAND5A= | |ZFAND5A= | ||
|ZNF216= | |ZNF216= | ||
| + | |all_trans=LF211276:120 MA446853:120 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| − | |distance= | + | |distance=120 |
| − | |distance_to_tss=- | + | |distance_to_tss=-570 |
|end=72365785 | |end=72365785 | ||
|end_of_center_position=72365779 | |end_of_center_position=72365779 | ||
|entrez_id=7763 | |entrez_id=7763 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias=ZA20D2 | + | |gene_alias=ZA20D2|ZFAND5A|ZNF216 |
|gene_description=zinc finger AN1-type containing 5 | |gene_description=zinc finger AN1-type containing 5 | ||
|gene_name=ZFAND5 | |gene_name=ZFAND5 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000107372 | |nearest_ensembl=ENSG00000107372 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001102421 |
|nearest_refseq=NM_006007 | |nearest_refseq=NM_006007 | ||
|nearest_unigene=Hs.406096 | |nearest_unigene=Hs.406096 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=72365771 | |start=72365771 | ||
|start_of_center_position=72365778 | |start_of_center_position=72365778 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF211276 MA446853 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100954.1 | |tss_id=hg_100954.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Revision as of 15:32, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 72365778 |
|---|---|
| End of the center position in the TSS region: | 72365779 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF211276 MA446853 |
|---|---|
| Distance: | 120 |
| Num_trans: | 2 |
| All_trans: | LF211276:120 MA446853:120 |
TATA-Box annotation
| Distance to TSS: | -570 |
|---|---|
| Nearest PromoterID: | NM_001102421 |
| Entrez ID: | 7763 |
| Nearest Unigene: | Hs.406096 |
| Nearest Refseq: | NM_006007 |
| Nearest Ensembl: | ENSG00000107372 |
| Gene Name: | ZFAND5 |
| Gene Alias: | ZA20D2 |
| Gene Description: | zinc finger AN1-type containing 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
