Difference between revisions of "TSS:Hg 100985.1"
From referenceTSS
| Line 8: | Line 8: | ||
|PUMB1= | |PUMB1= | ||
|RALDH1= | |RALDH1= | ||
| − | |all_trans=ENST00000297785. | + | |all_trans=ENST00000297785.8:0 ENST00000376939.5:0 NM_000689:0 FJ224286:0 LP895625:0 AK302168:0 AK026641:3 AK000118:3 EU668318:3 AB209821:4 BC001505:22 AF003341:47 AY390731:47 EU794589:47 BT006921:47 DQ890669:47 DQ893850:47 AB587538:47 KJ890654:48 ENST00000493113.1:80 ENST00000482210.5:85 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-2 |
|end=72953063 | |end=72953063 | ||
|end_of_center_position=72953055 | |end_of_center_position=72953055 | ||
|entrez_id=216 | |entrez_id=216 | ||
|gc_percent=0.432836 | |gc_percent=0.432836 | ||
| − | |gene_alias=ALDC | + | |gene_alias=ALDC|ALDH-E1|ALDH1|ALDH11|HEL-9|HEL-S-53e|HEL12|PUMB1|RALDH1 |
|gene_description=aldehyde dehydrogenase 1 family member A1 | |gene_description=aldehyde dehydrogenase 1 family member A1 | ||
|gene_id=216 | |gene_id=216 | ||
| Line 30: | Line 30: | ||
|nearest_refseq=NM_000689 | |nearest_refseq=NM_000689 | ||
|nearest_unigene=Hs.76392 | |nearest_unigene=Hs.76392 | ||
| − | |num_trans= | + | |num_trans=21 |
|species=human | |species=human | ||
|start=72953046 | |start=72953046 | ||
|start_of_center_position=72953054 | |start_of_center_position=72953054 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000297785. | + | |transcript_name=ENST00000297785.8 ENST00000376939.5 NM_000689 FJ224286 LP895625 AK302168 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100985.1 | |tss_id=hg_100985.1 | ||
Revision as of 15:32, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 72953054 |
|---|---|
| End of the center position in the TSS region: | 72953055 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000297785.8 ENST00000376939.5 NM_000689 FJ224286 LP895625 AK302168 |
|---|---|
| Distance: | 0 |
| Num_trans: | 21 |
| All_trans: | ENST00000297785.8:0 ENST00000376939.5:0 NM_000689:0 FJ224286:0 LP895625:0 AK302168:0 AK026641:3 AK000118:3 EU668318:3 AB209821:4 BC001505:22 AF003341:47 AY390731:47 EU794589:47 BT006921:47 DQ890669:47 DQ893850:47 AB587538:47 KJ890654:48 ENST00000493113.1:80 ENST00000482210.5:85 |
TATA-Box annotation
| Distance to TSS: | -2 |
|---|---|
| Nearest PromoterID: | NM_000689 |
| Entrez ID: | 216 |
| Nearest Unigene: | Hs.76392 |
| Nearest Refseq: | NM_000689 |
| Nearest Ensembl: | ENSG00000165092 |
| Gene Name: | aldehyde dehydrogenase 1 family member A1 |
| Gene Alias: | ALDC |
| Gene Description: | aldehyde dehydrogenase 1 family member A1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.432836 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
