Difference between revisions of "TSS:Hg 100998.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|LPC1= | |LPC1= | ||
| − | |all_trans=ENST00000419959.5 | + | |all_trans=ENST00000419959.5:0 AK293176:0 ENST00000493311.1:13 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-71435 |
|end=73080453 | |end=73080453 | ||
|end_of_center_position=73080431 | |end_of_center_position=73080431 | ||
|entrez_id=301 | |entrez_id=301 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
| − | |gene_alias=ANX1 | + | |gene_alias=ANX1|LPC1 |
|gene_description=annexin A1 | |gene_description=annexin A1 | ||
|gene_id=216 | |gene_id=216 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_000700 | |nearest_refseq=NM_000700 | ||
|nearest_unigene=Hs.494173 | |nearest_unigene=Hs.494173 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=73080407 | |start=73080407 | ||
|start_of_center_position=73080430 | |start_of_center_position=73080430 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000419959.5 | + | |transcript_name=ENST00000419959.5 AK293176 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_100998.1 | |tss_id=hg_100998.1 | ||
Revision as of 15:33, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 73080430 |
|---|---|
| End of the center position in the TSS region: | 73080431 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000419959.5 AK293176 |
|---|---|
| Distance: | 0 |
| Num_trans: | 3 |
| All_trans: | ENST00000419959.5:0 AK293176:0 ENST00000493311.1:13 |
TATA-Box annotation
| Distance to TSS: | -71435 |
|---|---|
| Nearest PromoterID: | NM_000700 |
| Entrez ID: | 301 |
| Nearest Unigene: | Hs.494173 |
| Nearest Refseq: | NM_000700 |
| Nearest Ensembl: | ENSG00000135046 |
| Gene Name: | aldehyde dehydrogenase 1 family member A1 |
| Gene Alias: | ANX1 |
| Gene Description: | annexin A1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
