Difference between revisions of "TSS:Hg 101022.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=KJ894122:-45 BC039588:-253 AK225349:-283 | + | |all_trans=KJ894122:-45 BC039588:-253 AK225349:-283 AK000972:-319 ENST00000376854.6:-345 NM_017998:-345 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
|distance=-45 | |distance=-45 | ||
| − | |distance_to_tss= | + | |distance_to_tss=358 |
|end=74952567 | |end=74952567 | ||
|end_of_center_position=74952555 | |end_of_center_position=74952555 | ||
| Line 17: | Line 17: | ||
|nearest_refseq=NM_017998 | |nearest_refseq=NM_017998 | ||
|nearest_unigene=Hs.532296 | |nearest_unigene=Hs.532296 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=74952541 | |start=74952541 | ||
Latest revision as of 15:33, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 74952554 |
|---|---|
| End of the center position in the TSS region: | 74952555 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | KJ894122 |
|---|---|
| Distance: | -45 |
| Num_trans: | 6 |
| All_trans: | KJ894122:-45 BC039588:-253 AK225349:-283 AK000972:-319 ENST00000376854.6:-345 NM_017998:-345 |
TATA-Box annotation
| Distance to TSS: | 358 |
|---|---|
| Nearest PromoterID: | NM_017998 |
| Entrez ID: | 55071 |
| Nearest Unigene: | Hs.532296 |
| Nearest Refseq: | NM_017998 |
| Nearest Ensembl: | ENSG00000135045 |
| Gene Name: | C9orf40 |
| Gene Alias: | - |
| Gene Description: | chromosome 9 open reading frame 40 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
