Difference between revisions of "TSS:Hg 101028.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|UPF0586= | |UPF0586= | ||
| − | |all_trans= | + | |all_trans=ENST00000376830.3:0 NR_135282:0 BC034033:0 ENST00000376834.8:99 NM_152420:99 AK299691:119 HQ447650:151 KJ895522:151 EU832520:151 EU832602:151 CU689816:151 BX647386:193 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| Line 10: | Line 10: | ||
|entrez_id=138199 | |entrez_id=138199 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias=C9orf41 | + | |gene_alias=C9orf41|UPF0586 |
|gene_description=carnosine N-methyltransferase 1 | |gene_description=carnosine N-methyltransferase 1 | ||
|gene_id=138199 | |gene_id=138199 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:23435 | |hgnc_mgi_id=HGNC:23435 | ||
|nearest_ensembl=ENSG00000156017 | |nearest_ensembl=ENSG00000156017 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_135282 |
|nearest_refseq=NM_152420 | |nearest_refseq=NM_152420 | ||
|nearest_unigene=Hs.567688 | |nearest_unigene=Hs.567688 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=human | |species=human | ||
|start=75028391 | |start=75028391 | ||
|start_of_center_position=75028420 | |start_of_center_position=75028420 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000376830.3 NR_135282 BC034033 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101028.1 | |tss_id=hg_101028.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q5T8U9 | + | |uniprot_id=Q5T8U9 |
}} | }} | ||
Revision as of 15:33, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 75028420 |
|---|---|
| End of the center position in the TSS region: | 75028421 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000376830.3 NR_135282 BC034033 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12 |
| All_trans: | ENST00000376830.3:0 NR_135282:0 BC034033:0 ENST00000376834.8:99 NM_152420:99 AK299691:119 HQ447650:151 KJ895522:151 EU832520:151 EU832602:151 CU689816:151 BX647386:193 |
TATA-Box annotation
| Distance to TSS: | 9 |
|---|---|
| Nearest PromoterID: | NR_135282 |
| Entrez ID: | 138199 |
| Nearest Unigene: | Hs.567688 |
| Nearest Refseq: | NM_152420 |
| Nearest Ensembl: | ENSG00000156017 |
| Gene Name: | carnosine N-methyltransferase 1 |
| Gene Alias: | C9orf41 |
| Gene Description: | carnosine N-methyltransferase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
