Difference between revisions of "TSS:Hg 101096.1"
From referenceTSS
| Line 3: | Line 3: | ||
|GAQ= | |GAQ= | ||
|SWS= | |SWS= | ||
| − | |all_trans=ENST00000286548. | + | |all_trans=ENST00000286548.9:117 NM_002072:117 U43083:473 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| − | |distance= | + | |distance=117 |
| − | |distance_to_tss=- | + | |distance_to_tss=-155 |
|end=78032005 | |end=78032005 | ||
|end_of_center_position=78031967 | |end_of_center_position=78031967 | ||
|entrez_id=2776 | |entrez_id=2776 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| − | |gene_alias=CMC1 | + | |gene_alias=CMC1|G-ALPHA-q|GAQ|SWS |
|gene_description=G protein subunit alpha q | |gene_description=G protein subunit alpha q | ||
|gene_id=2776 | |gene_id=2776 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_002072 | |nearest_refseq=NM_002072 | ||
|nearest_unigene=Hs.269782 | |nearest_unigene=Hs.269782 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=78031927 | |start=78031927 | ||
|start_of_center_position=78031966 | |start_of_center_position=78031966 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000286548. | + | |transcript_name=ENST00000286548.9 NM_002072 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101096.1 | |tss_id=hg_101096.1 | ||
Revision as of 15:35, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 78031966 |
|---|---|
| End of the center position in the TSS region: | 78031967 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000286548.9 NM_002072 |
|---|---|
| Distance: | 117 |
| Num_trans: | 3 |
| All_trans: | ENST00000286548.9:117 NM_002072:117 U43083:473 |
TATA-Box annotation
| Distance to TSS: | -155 |
|---|---|
| Nearest PromoterID: | NM_002072 |
| Entrez ID: | 2776 |
| Nearest Unigene: | Hs.269782 |
| Nearest Refseq: | NM_002072 |
| Nearest Ensembl: | ENSG00000156052 |
| Gene Name: | G protein subunit alpha q |
| Gene Alias: | CMC1 |
| Gene Description: | G protein subunit alpha q |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
