Difference between revisions of "TSS:Hg 101110.1"
From referenceTSS
| Line 8: | Line 8: | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=-396 |
|end=79572790 | |end=79572790 | ||
|end_of_center_position=79572782 | |end_of_center_position=79572782 | ||
|entrez_id=7091 | |entrez_id=7091 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
| − | |gene_alias=BCE-1 | + | |gene_alias=BCE-1|BCE1|E(spI)|E(spl)|ESG|ESG4|GRG4|Grg-4 |
| − | |gene_description= | + | |gene_description=TLE family member 4, transcriptional corepressor |
|gene_name=TLE4 | |gene_name=TLE4 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000106829 | |nearest_ensembl=ENSG00000106829 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001351546 |
|nearest_refseq=NM_007005 | |nearest_refseq=NM_007005 | ||
|nearest_unigene=Hs.444213 | |nearest_unigene=Hs.444213 | ||
| Line 27: | Line 27: | ||
|start_of_center_position=79572781 | |start_of_center_position=79572781 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=39(GCTTTAATGACC,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=yes | |tss_classification=yes | ||
Revision as of 15:35, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 79572781 |
|---|---|
| End of the center position in the TSS region: | 79572782 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -396 |
|---|---|
| Nearest PromoterID: | NM_001351546 |
| Entrez ID: | 7091 |
| Nearest Unigene: | Hs.444213 |
| Nearest Refseq: | NM_007005 |
| Nearest Ensembl: | ENSG00000106829 |
| Gene Name: | TLE4 |
| Gene Alias: | BCE-1 |
| Gene Description: | TLE family member 4, transcriptional corepressor |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 39(GCTTTAATGACC,+,0.00) |
