Difference between revisions of "TSS:Hg 100031.1"
From referenceTSS
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| Line 4: | Line 4: | ||
|DNZ1= | |DNZ1= | ||
|HSPC097= | |HSPC097= | ||
| + | |all_trans=LF355379:373 MA590956:373 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=373 |
| − | |distance_to_tss= | + | |distance_to_tss=16029 |
|end=14677417 | |end=14677417 | ||
| + | |end_of_center_position=14677403 | ||
|entrez_id=340481 | |entrez_id=340481 | ||
|gc_percent=0.422886 | |gc_percent=0.422886 | ||
| − | |gene_alias= | + | |gene_alias=DHHC-21{{!}}DHHC21{{!}}DNZ1{{!}}HSPC097 |
|gene_description=zinc finger DHHC-type containing 21 | |gene_description=zinc finger DHHC-type containing 21 | ||
|gene_name=ZDHHC21 | |gene_name=ZDHHC21 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000175893 | |nearest_ensembl=ENSG00000175893 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001354122 |
|nearest_refseq=NM_178566 | |nearest_refseq=NM_178566 | ||
|nearest_unigene=Hs.649522 | |nearest_unigene=Hs.649522 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=14677388 | |start=14677388 | ||
| + | |start_of_center_position=14677402 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF355379 MA590956 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_100031.1 | |tss_id=hg_100031.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:08, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 14677402 |
|---|---|
| End of the center position in the TSS region: | 14677403 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | LF355379 MA590956 |
|---|---|
| Distance: | 373 |
| Num_trans: | 2 |
| All_trans: | LF355379:373 MA590956:373 |
TATA-Box annotation
| Distance to TSS: | 16029 |
|---|---|
| Nearest PromoterID: | NM_001354122 |
| Entrez ID: | 340481 |
| Nearest Unigene: | Hs.649522 |
| Nearest Refseq: | NM_178566 |
| Nearest Ensembl: | ENSG00000175893 |
| Gene Name: | ZDHHC21 |
| Gene Alias: | DHHC-21|DHHC21|DNZ1|HSPC097 |
| Gene Description: | zinc finger DHHC-type containing 21 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.422886 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
