Difference between revisions of "TSS:Hg 100061.1"
From referenceTSS
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| Line 6: | Line 6: | ||
|TILRR= | |TILRR= | ||
|TRIGNO2= | |TRIGNO2= | ||
| − | |all_trans=ENST00000397561.3:97 | + | |all_trans=LF207464:60 MA443041:60 LF366486:60 MA602063:60 ENST00000397561.3:97 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=60 |
|distance_to_tss=-11437 | |distance_to_tss=-11437 | ||
|end=14922434 | |end=14922434 | ||
| + | |end_of_center_position=14922433 | ||
|entrez_id=158326 | |entrez_id=158326 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
| − | |gene_alias=BNAR | + | |gene_alias=BNAR{{!}}C9orf143{{!}}C9orf145{{!}}C9orf154{{!}}MOTA{{!}}TILRR{{!}}TRIGNO2 |
|gene_description=FRAS1 related extracellular matrix 1 | |gene_description=FRAS1 related extracellular matrix 1 | ||
|gene_id= | |gene_id= | ||
| − | |gene_name= | + | |gene_name=FREM1 |
|gene_source=HGNC:6539 | |gene_source=HGNC:6539 | ||
|gene_symbol=LDHAP4 | |gene_symbol=LDHAP4 | ||
| Line 24: | Line 25: | ||
|hgnc_mgi_id=HGNC:6539 | |hgnc_mgi_id=HGNC:6539 | ||
|nearest_ensembl=ENSG00000164946 | |nearest_ensembl=ENSG00000164946 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_163238 |
|nearest_refseq=NM_144966 | |nearest_refseq=NM_144966 | ||
|nearest_unigene=Hs.50850 | |nearest_unigene=Hs.50850 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=human | |species=human | ||
|start=14922430 | |start=14922430 | ||
| + | |start_of_center_position=14922432 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF207464 MA443041 LF366486 MA602063 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_100061.1 | |tss_id=hg_100061.1 | ||
Latest revision as of 16:09, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 14922432 |
|---|---|
| End of the center position in the TSS region: | 14922433 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | LF207464 MA443041 LF366486 MA602063 |
|---|---|
| Distance: | 60 |
| Num_trans: | 5 |
| All_trans: | LF207464:60 MA443041:60 LF366486:60 MA602063:60 ENST00000397561.3:97 |
TATA-Box annotation
| Distance to TSS: | -11437 |
|---|---|
| Nearest PromoterID: | NR_163238 |
| Entrez ID: | 158326 |
| Nearest Unigene: | Hs.50850 |
| Nearest Refseq: | NM_144966 |
| Nearest Ensembl: | ENSG00000164946 |
| Gene Name: | FREM1 |
| Gene Alias: | BNAR|C9orf143|C9orf145|C9orf154|MOTA|TILRR|TRIGNO2 |
| Gene Description: | FRAS1 related extracellular matrix 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
