Difference between revisions of "TSS:Hg 100158.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=-31406 |entrez_id=55667 |gc_percent=0.38806 |gene_alias=C9orf55|C9orf55B|RAB10GEF|bA513M16.3 |gene_description=DENN domain containi...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |C9orf55B= | ||
| + | |RAB10GEF= | ||
| + | |bA513M16.3= | ||
| + | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance_to_tss=- | + | |distance=NA |
| + | |distance_to_tss=-31609 | ||
| + | |end=19199085 | ||
| + | |end_of_center_position=19199085 | ||
|entrez_id=55667 | |entrez_id=55667 | ||
|gc_percent=0.38806 | |gc_percent=0.38806 | ||
| − | |gene_alias=C9orf55 | + | |gene_alias=C9orf55{{!}}C9orf55B{{!}}RAB10GEF{{!}}bA513M16.3 |
|gene_description=DENN domain containing 4C | |gene_description=DENN domain containing 4C | ||
|gene_name=DENND4C | |gene_name=DENND4C | ||
| Line 12: | Line 19: | ||
|nearest_refseq=NM_017925 | |nearest_refseq=NM_017925 | ||
|nearest_unigene=Hs.249591 | |nearest_unigene=Hs.249591 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=19199083 | ||
| + | |start_of_center_position=19199084 | ||
| + | |strand=- | ||
| + | |tata_box=-33(CTCTATAAAAGC,-,0.00),13(GTTTATAAAAGC,-,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_100158.1 | |tss_id=hg_100158.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:11, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 19199084 |
|---|---|
| End of the center position in the TSS region: | 19199085 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -31609 |
|---|---|
| Nearest PromoterID: | NM_001330640 |
| Entrez ID: | 55667 |
| Nearest Unigene: | Hs.249591 |
| Nearest Refseq: | NM_017925 |
| Nearest Ensembl: | ENSG00000137145 |
| Gene Name: | DENND4C |
| Gene Alias: | C9orf55|C9orf55B|RAB10GEF|bA513M16.3 |
| Gene Description: | DENN domain containing 4C |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.38806 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -33(CTCTATAAAAGC,-,0.00),13(GTTTATAAAAGC,-,0.00) |
