Difference between revisions of "TSS:Hg 100168.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=101602 |entrez_id=340485 |gc_percent=0.40796 |gene_alias=ALKCDase2|ASAH3L |gene_description=alkaline ceramidase 2 |gene_name=ACE...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ASAH3L= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=101520 | ||
| + | |end=19510537 | ||
| + | |end_of_center_position=19510530 | ||
|entrez_id=340485 | |entrez_id=340485 | ||
|gc_percent=0.40796 | |gc_percent=0.40796 | ||
| − | |gene_alias=ALKCDase2 | + | |gene_alias=ALKCDase2{{!}}ASAH3L |
|gene_description=alkaline ceramidase 2 | |gene_description=alkaline ceramidase 2 | ||
|gene_name=ACER2 | |gene_name=ACER2 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_001010887 | |nearest_refseq=NM_001010887 | ||
|nearest_unigene=Hs.41379 | |nearest_unigene=Hs.41379 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=19510521 | ||
| + | |start_of_center_position=19510529 | ||
| + | |strand=- | ||
| + | |tata_box=-100(CCATTAAGAGGG,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_100168.1 | |tss_id=hg_100168.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:11, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 19510529 |
|---|---|
| End of the center position in the TSS region: | 19510530 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 101520 |
|---|---|
| Nearest PromoterID: | NM_001010887 |
| Entrez ID: | 340485 |
| Nearest Unigene: | Hs.41379 |
| Nearest Refseq: | NM_001010887 |
| Nearest Ensembl: | ENSG00000177076 |
| Gene Name: | ACER2 |
| Gene Alias: | ALKCDase2|ASAH3L |
| Gene Description: | alkaline ceramidase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.40796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -100(CCATTAAGAGGG,+,0.00) |
