Difference between revisions of "TSS:Hg 100339.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=-63652 |entrez_id=56832 |gc_percent=0.507463 |gene_alias=IFNT1|INFE1 |gene_description=interferon kappa |gene_name=IFNK |gene_type=...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |INFE1= | ||
| + | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| + | |distance=NA | ||
|distance_to_tss=-63652 | |distance_to_tss=-63652 | ||
| + | |end=27460686 | ||
| + | |end_of_center_position=27460663 | ||
|entrez_id=56832 | |entrez_id=56832 | ||
|gc_percent=0.507463 | |gc_percent=0.507463 | ||
| − | |gene_alias=IFNT1 | + | |gene_alias=IFNT1{{!}}INFE1 |
|gene_description=interferon kappa | |gene_description=interferon kappa | ||
|gene_name=IFNK | |gene_name=IFNK | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_020124 | |nearest_refseq=NM_020124 | ||
|nearest_unigene=Hs.591083 | |nearest_unigene=Hs.591083 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=27460638 | ||
| + | |start_of_center_position=27460662 | ||
| + | |strand=- | ||
| + | |tata_box=-94(TCTCTTATGGCC,+,0.00),68(GTCTCTTAGAGG,-,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_100339.1 | |tss_id=hg_100339.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:15, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 27460662 |
|---|---|
| End of the center position in the TSS region: | 27460663 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -63652 |
|---|---|
| Nearest PromoterID: | NM_020124 |
| Entrez ID: | 56832 |
| Nearest Unigene: | Hs.591083 |
| Nearest Refseq: | NM_020124 |
| Nearest Ensembl: | ENSG00000147896 |
| Gene Name: | IFNK |
| Gene Alias: | IFNT1|INFE1 |
| Gene Description: | interferon kappa |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -94(TCTCTTATGGCC,+,0.00),68(GTCTCTTAGAGG,-,0.00) |
