Difference between revisions of "TSS:Hg 100386.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=2057 |entrez_id=23586 |gc_percent=0.353234 |gene_alias=RIG-I|RIGI|RLR-1|SGMRT2 |gene_description=DExD/H-box helicase 58 |gene_n...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |RIG1= | ||
| + | |RIGI= | ||
| + | |RLR-1= | ||
| + | |SGMRT2= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=1929 | ||
| + | |end=32524276 | ||
| + | |end_of_center_position=32524267 | ||
|entrez_id=23586 | |entrez_id=23586 | ||
|gc_percent=0.353234 | |gc_percent=0.353234 | ||
| − | |gene_alias=RIG-I | + | |gene_alias=RIG-I{{!}}RIG1{{!}}RIGI{{!}}RLR-1{{!}}SGMRT2 |
|gene_description=DExD/H-box helicase 58 | |gene_description=DExD/H-box helicase 58 | ||
|gene_name=DDX58 | |gene_name=DDX58 | ||
| Line 12: | Line 20: | ||
|nearest_refseq=NM_014314 | |nearest_refseq=NM_014314 | ||
|nearest_unigene=Hs.190622 | |nearest_unigene=Hs.190622 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=32524257 | ||
| + | |start_of_center_position=32524266 | ||
| + | |strand=- | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_100386.1 | |tss_id=hg_100386.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:16, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 32524266 |
|---|---|
| End of the center position in the TSS region: | 32524267 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 1929 |
|---|---|
| Nearest PromoterID: | NM_014314 |
| Entrez ID: | 23586 |
| Nearest Unigene: | Hs.190622 |
| Nearest Refseq: | NM_014314 |
| Nearest Ensembl: | ENSG00000107201 |
| Gene Name: | DDX58 |
| Gene Alias: | RIG-I|RIG1|RIGI|RLR-1|SGMRT2 |
| Gene Description: | DExD/H-box helicase 58 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.353234 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
