Difference between revisions of "TSS:Hg 100405.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=31716 |entrez_id=54840 |gc_percent=0.457711 |gene_alias=AOA|AOA1|AXA1|EAOH|EOAHA|FHA-HIT |gene_description=aprataxin |gene_name=...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |AOA1= | ||
| + | |AXA1= | ||
| + | |EAOH= | ||
| + | |EOAHA= | ||
| + | |FHA-HIT= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=NA | ||
|distance_to_tss=31716 | |distance_to_tss=31716 | ||
| + | |end=32969863 | ||
| + | |end_of_center_position=32969861 | ||
|entrez_id=54840 | |entrez_id=54840 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
| − | |gene_alias=AOA | + | |gene_alias=AOA{{!}}AOA1{{!}}AXA1{{!}}EAOH{{!}}EOAHA{{!}}FHA-HIT |
|gene_description=aprataxin | |gene_description=aprataxin | ||
|gene_name=APTX | |gene_name=APTX | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000137074 | |nearest_ensembl=ENSG00000137074 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001195249 |
|nearest_refseq=NM_017692 | |nearest_refseq=NM_017692 | ||
|nearest_unigene=Hs.20158 | |nearest_unigene=Hs.20158 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=32969857 | ||
| + | |start_of_center_position=32969860 | ||
| + | |strand=- | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_100405.1 | |tss_id=hg_100405.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:16, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 32969860 |
|---|---|
| End of the center position in the TSS region: | 32969861 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 31716 |
|---|---|
| Nearest PromoterID: | NM_001195249 |
| Entrez ID: | 54840 |
| Nearest Unigene: | Hs.20158 |
| Nearest Refseq: | NM_017692 |
| Nearest Ensembl: | ENSG00000137074 |
| Gene Name: | APTX |
| Gene Alias: | AOA|AOA1|AXA1|EAOH|EOAHA|FHA-HIT |
| Gene Description: | aprataxin |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
