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Difference between revisions of "TSS:Hg 100417.1"

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Line 11: Line 11:
 
|fSAP57=
 
|fSAP57=
 
|gc_percent=0.61194
 
|gc_percent=0.61194
|gene_alias=BWD|SMU-1|fSAP57
+
|gene_alias=BWD{{!}}SMU-1{{!}}fSAP57
 
|gene_description=SMU1 DNA replication regulator and spliceosomal factor
 
|gene_description=SMU1 DNA replication regulator and spliceosomal factor
 
|gene_id=55234
 
|gene_id=55234

Revision as of 16:17, 15 June 2021

Basic information about the TSS


TSS ID:hg_100417.1
Species:human
Chr:chr9
TSS Classification:yes
Start:33076654
End:33076699
Strand:-
TSS Score:1
Start of the center position in the TSS region:33076676
End of the center position in the TSS region:33076677



Gene and protein annotation


Transcript_name:ENST00000397149.4 NM_018225 AK225559 AK225587 AK304767
Distance:0
GeneID:55234
HGNC/MGI_ID:HGNC:18247
UniProt_ID:A0MNN4 Q2TAY7
Gene_name:SMU1 DNA replication regulator and spliceosomal factor
Gene_symbol:SMU1
Gene_synonyms:BWD FLJ10805 SMU-1 fSAP57
Gene_source:HGNC:18247



Transcript annotation


Transcript_name:ENST00000397149.4 NM_018225 AK225559 AK225587 AK304767
Distance:0
Num_trans:13
All_trans:ENST00000397149.4:0 NM_018225:0 AK225559:0 AK225587:0 AK304767:0 BC002876:3 EF011613:3 AK001667:9 LP895622:-21 KJ894162:45 DQ893005:47 DQ896251:47 CU678268:47



TATA-Box annotation


Distance to TSS:-3
Nearest PromoterID:NM_018225
Entrez ID:55234
Nearest Unigene:Hs.655351
Nearest Refseq:NM_018225
Nearest Ensembl:ENSG00000122692
Gene Name:SMU1 DNA replication regulator and spliceosomal factor
Gene Alias:BWD|SMU-1|fSAP57
Gene Description:SMU1 DNA replication regulator and spliceosomal factor
Gene Type:protein-coding
CpG%:0.105
GC%:0.61194
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):