Difference between revisions of "TSS:Hg 100452.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=807 |entrez_id=51510 |gc_percent=0.472637 |gene_alias=C9orf83|CGI-34|HSPC177|PNAS-2|SNF7DC2|Vps60 |gene_description=charged mul...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CGI-34= | ||
| + | |HSPC177= | ||
| + | |PNAS-2= | ||
| + | |SNF7DC2= | ||
| + | |Vps60= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=637 | ||
| + | |end=33265691 | ||
| + | |end_of_center_position=33265687 | ||
|entrez_id=51510 | |entrez_id=51510 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
| − | |gene_alias=C9orf83 | + | |gene_alias=C9orf83{{!}}CGI-34{{!}}HSPC177{{!}}PNAS-2{{!}}SNF7DC2{{!}}Vps60 |
|gene_description=charged multivesicular body protein 5 | |gene_description=charged multivesicular body protein 5 | ||
|gene_name=CHMP5 | |gene_name=CHMP5 | ||
| Line 12: | Line 21: | ||
|nearest_refseq=NM_016410 | |nearest_refseq=NM_016410 | ||
|nearest_unigene=Hs.635313 | |nearest_unigene=Hs.635313 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=33265681 | ||
| + | |start_of_center_position=33265686 | ||
| + | |strand=- | ||
| + | |transcript_name= | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100452.1 | |tss_id=hg_100452.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:17, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 33265686 |
|---|---|
| End of the center position in the TSS region: | 33265687 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 637 |
|---|---|
| Nearest PromoterID: | NM_016410 |
| Entrez ID: | 51510 |
| Nearest Unigene: | Hs.635313 |
| Nearest Refseq: | NM_016410 |
| Nearest Ensembl: | ENSG00000086065 |
| Gene Name: | CHMP5 |
| Gene Alias: | C9orf83|CGI-34|HSPC177|PNAS-2|SNF7DC2|Vps60 |
| Gene Description: | charged multivesicular body protein 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
