Difference between revisions of "TSS:Hg 100536.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 8: | Line 8: | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=2011 |
|end=34635782 | |end=34635782 | ||
| + | |end_of_center_position=34635776 | ||
|entrez_id=10280 | |entrez_id=10280 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias=ALS16 | + | |gene_alias=ALS16{{!}}DSMA2{{!}}OPRS1{{!}}SIG-1R{{!}}SR-BP{{!}}SR-BP1{{!}}SRBP{{!}}hSigmaR1{{!}}sigma1R |
|gene_description=sigma non-opioid intracellular receptor 1 | |gene_description=sigma non-opioid intracellular receptor 1 | ||
|gene_name=SIGMAR1 | |gene_name=SIGMAR1 | ||
| Line 19: | Line 20: | ||
|hSigmaR1= | |hSigmaR1= | ||
|nearest_ensembl=ENSG00000147955 | |nearest_ensembl=ENSG00000147955 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001282205 |
|nearest_refseq=NM_005866 | |nearest_refseq=NM_005866 | ||
|nearest_unigene=Hs.522087 | |nearest_unigene=Hs.522087 | ||
| Line 26: | Line 27: | ||
|species=human | |species=human | ||
|start=34635769 | |start=34635769 | ||
| + | |start_of_center_position=34635775 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name= | ||
Latest revision as of 16:19, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 34635775 |
|---|---|
| End of the center position in the TSS region: | 34635776 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 2011 |
|---|---|
| Nearest PromoterID: | NM_001282205 |
| Entrez ID: | 10280 |
| Nearest Unigene: | Hs.522087 |
| Nearest Refseq: | NM_005866 |
| Nearest Ensembl: | ENSG00000147955 |
| Gene Name: | SIGMAR1 |
| Gene Alias: | ALS16|DSMA2|OPRS1|SIG-1R|SR-BP|SR-BP1|SRBP|hSigmaR1|sigma1R |
| Gene Description: | sigma non-opioid intracellular receptor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
