Difference between revisions of "TSS:Hg 10063.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |SPOC1= | ||
| + | |chr=chr1 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| − | |distance_to_tss=- | + | |distance=NA |
| + | |distance_to_tss=-574 | ||
| + | |end=6613176 | ||
| + | |end_of_center_position=6613158 | ||
|entrez_id=148479 | |entrez_id=148479 | ||
|gc_percent=0.761194 | |gc_percent=0.761194 | ||
| − | |gene_alias=PHF5 | + | |gene_alias=PHF5{{!}}SPOC1 |
|gene_description=PHD finger protein 13 | |gene_description=PHD finger protein 13 | ||
|gene_name=PHF13 | |gene_name=PHF13 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_153812 | |nearest_refseq=NM_153812 | ||
|nearest_unigene=Hs.516079 | |nearest_unigene=Hs.516079 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=6613138 | ||
| + | |start_of_center_position=6613157 | ||
| + | |strand=- | ||
| + | |transcript_name= | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10063.1 | |tss_id=hg_10063.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:21, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6613157 |
|---|---|
| End of the center position in the TSS region: | 6613158 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -574 |
|---|---|
| Nearest PromoterID: | NM_153812 |
| Entrez ID: | 148479 |
| Nearest Unigene: | Hs.516079 |
| Nearest Refseq: | NM_153812 |
| Nearest Ensembl: | ENSG00000116273 |
| Gene Name: | PHF13 |
| Gene Alias: | PHF5|SPOC1 |
| Gene Description: | PHD finger protein 13 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
