Difference between revisions of "TSS:Hg 100646.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |LZIP= | ||
| + | |TLN= | ||
| + | |all_trans=LF354354:3 MA589931:3 ENST00000314888.10:12 NM_006289:12 BC042923:26 AF078828:58 AF177198:76 ENST00000378192.2:103 BC020881:103 BC021005:-144 AB028950:-153 LF354355:-228 MA589932:-228 LF206432:-433 MA442009:-433 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| − | |distance_to_tss=- | + | |distance=3 |
| − | |entrez_id= | + | |distance_to_tss=-17 |
| + | |end=35732217 | ||
| + | |end_of_center_position=35732212 | ||
| + | |entrez_id=7094 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
| − | |gene_alias= | + | |gene_alias=ILWEQ{{!}}TLN{{!}}talin-1 |
| − | | | + | |gene_description=talin 1 |
| − | | | + | |gene_id=7094 |
| + | |gene_name=TLN1 | ||
| + | |gene_source=HGNC:11845 | ||
| + | |gene_symbol=TLN1 | ||
| + | |gene_synonyms=ILWEQ | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |nearest_ensembl= | + | |hgnc_mgi_id=HGNC:11845 |
| − | |nearest_promoter_id= | + | |nearest_ensembl=ENSG00000137076 |
| − | |nearest_refseq= | + | |nearest_promoter_id=NM_006289 |
| − | |nearest_unigene=Hs. | + | |nearest_refseq=NM_006289 |
| + | |nearest_unigene=Hs.471014 | ||
| + | |num_trans=15 | ||
| + | |sLZIP= | ||
| + | |species=human | ||
| + | |start=35732206 | ||
| + | |start_of_center_position=35732211 | ||
| + | |strand=- | ||
| + | |talin-1= | ||
| + | |transcript_name=LF354354 MA589931 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100646.1 | |tss_id=hg_100646.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 16:22, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 35732211 |
|---|---|
| End of the center position in the TSS region: | 35732212 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | LF354354 MA589931 |
|---|---|
| Distance: | 3 |
| Num_trans: | 15 |
| All_trans: | LF354354:3 MA589931:3 ENST00000314888.10:12 NM_006289:12 BC042923:26 AF078828:58 AF177198:76 ENST00000378192.2:103 BC020881:103 BC021005:-144 AB028950:-153 LF354355:-228 MA589932:-228 LF206432:-433 MA442009:-433 |
TATA-Box annotation
| Distance to TSS: | -17 |
|---|---|
| Nearest PromoterID: | NM_006289 |
| Entrez ID: | 7094 |
| Nearest Unigene: | Hs.471014 |
| Nearest Refseq: | NM_006289 |
| Nearest Ensembl: | ENSG00000137076 |
| Gene Name: | TLN1 |
| Gene Alias: | ILWEQ|TLN|talin-1 |
| Gene Description: | talin 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
