Difference between revisions of "TSS:Hg 100721.1"
From referenceTSS
| Line 10: | Line 10: | ||
|entrez_id=5079 | |entrez_id=5079 | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
| − | |gene_alias=ALL3 | + | |gene_alias=ALL3{{!}}BSAP |
|gene_description=paired box 5 | |gene_description=paired box 5 | ||
|gene_id=5079 | |gene_id=5079 | ||
Revision as of 16:23, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 37034474 |
|---|---|
| End of the center position in the TSS region: | 37034475 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000358127.9 ENST00000377852.7 ENST00000523241.6 NM_001280548 NM_001280556 NM_001280547 NR_104000 NM_016734 NM_001280550 NM_001280554 NM_001280553 NM_001280552 NM_001280551 NM_001280549 NM_001280555 NR_103999 |
|---|---|
| Distance: | 205 |
| Num_trans: | 43 |
| All_trans: | ENST00000358127.9:205 ENST00000377852.7:205 ENST00000523241.6:205 NM_001280548:205 NM_001280556:205 NM_001280547:205 NR_104000:205 NM_016734:205 NM_001280550:205 NM_001280554:205 NM_001280553:205 NM_001280552:205 NM_001280551:205 NM_001280549:205 NM_001280555:205 NR_103999:205 ENST00000520154.6:288 M96944:367 ENST00000377853.6:432 ENST00000377840.6:432 AY463952:432 AY463953:432 AY463954:432 AY463955:432 AY463956:432 AY463957:432 ENST00000520281.5:442 ENST00000446742.5:442 ENST00000522003.5:442 ENST00000523145.5:442 ENST00000523493.5:442 ENST00000414447.5:442 ENST00000377847.6:442 FJ626419:442 FJ626420:442 FJ626421:442 FJ626422:442 FJ626423:442 FJ626424:442 FJ626425:442 BC156189:442 BC156927:442 AB529192:442 |
TATA-Box annotation
| Distance to TSS: | -207 |
|---|---|
| Nearest PromoterID: | NM_001280553 |
| Entrez ID: | 5079 |
| Nearest Unigene: | Hs.654464 |
| Nearest Refseq: | NM_016734 |
| Nearest Ensembl: | ENSG00000196092 |
| Gene Name: | paired box 5 |
| Gene Alias: | ALL3|BSAP |
| Gene Description: | paired box 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -34(CCCTATAAAAGT,-,0.00) |
