Difference between revisions of "TSS:Hg 100819.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=169290 |entrez_id=320 |gc_percent=0.348259 |gene_alias=D9S411E|LIN10|MINT1|X11|X11A|X11ALPHA |gene_description=amyloid beta pre...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |LIN10= | ||
| + | |MINT1= | ||
| + | |X11= | ||
| + | |X11A= | ||
| + | |X11ALPHA= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=169302 | ||
| + | |end=69503072 | ||
| + | |end_of_center_position=69503069 | ||
|entrez_id=320 | |entrez_id=320 | ||
|gc_percent=0.348259 | |gc_percent=0.348259 | ||
| − | |gene_alias=D9S411E | + | |gene_alias=D9S411E{{!}}LIN10{{!}}MINT1{{!}}X11{{!}}X11A{{!}}X11ALPHA |
|gene_description=amyloid beta precursor protein binding family A member 1 | |gene_description=amyloid beta precursor protein binding family A member 1 | ||
|gene_name=APBA1 | |gene_name=APBA1 | ||
| Line 12: | Line 21: | ||
|nearest_refseq=NM_001163 | |nearest_refseq=NM_001163 | ||
|nearest_unigene=Hs.171939 | |nearest_unigene=Hs.171939 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=69503065 | ||
| + | |start_of_center_position=69503068 | ||
| + | |strand=- | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_100819.1 | |tss_id=hg_100819.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:25, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 69503068 |
|---|---|
| End of the center position in the TSS region: | 69503069 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 169302 |
|---|---|
| Nearest PromoterID: | NM_001163 |
| Entrez ID: | 320 |
| Nearest Unigene: | Hs.171939 |
| Nearest Refseq: | NM_001163 |
| Nearest Ensembl: | ENSG00000107282 |
| Gene Name: | APBA1 |
| Gene Alias: | D9S411E|LIN10|MINT1|X11|X11A|X11ALPHA |
| Gene Description: | amyloid beta precursor protein binding family A member 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.348259 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
