Difference between revisions of "TSS:Hg 100844.1"
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{{TSSDetail | {{TSSDetail | ||
|BTEB1= | |BTEB1= | ||
| − | |all_trans=BC069431:35 AK313631:35 BC074879:60 BC074880:60 EU446889:105 AB464604:107 CU686806:108 AB451404:109 | + | |all_trans=LF345228:23 MA580805:23 BC069431:35 AK313631:35 BC074879:60 BC074880:60 EU446889:105 AB464604:107 CU686806:108 AB451404:109 LF213686:161 MA449263:161 LF345227:-269 MA580804:-269 LF345229:459 MA580806:459 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.175 | |cpg_percent=0.175 | ||
| − | |distance= | + | |distance=23 |
|distance_to_tss=1170 | |distance_to_tss=1170 | ||
|end=70413502 | |end=70413502 | ||
| + | |end_of_center_position=70413487 | ||
|entrez_id=687 | |entrez_id=687 | ||
|gc_percent=0.761194 | |gc_percent=0.761194 | ||
| − | |gene_alias=BTEB | + | |gene_alias=BTEB{{!}}BTEB1 |
|gene_description=Kruppel like factor 9 | |gene_description=Kruppel like factor 9 | ||
|gene_id=687 | |gene_id=687 | ||
| − | |gene_name= | + | |gene_name=KLF9 |
|gene_source=HGNC:1123 | |gene_source=HGNC:1123 | ||
|gene_symbol=KLF9 | |gene_symbol=KLF9 | ||
| Line 22: | Line 23: | ||
|nearest_refseq=NM_001206 | |nearest_refseq=NM_001206 | ||
|nearest_unigene=Hs.150557 | |nearest_unigene=Hs.150557 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=70413471 | |start=70413471 | ||
| + | |start_of_center_position=70413486 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF345228 MA580805 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100844.1 | |tss_id=hg_100844.1 | ||
Latest revision as of 16:26, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 70413486 |
|---|---|
| End of the center position in the TSS region: | 70413487 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | LF345228 MA580805 |
|---|---|
| Distance: | 23 |
| Num_trans: | 16 |
| All_trans: | LF345228:23 MA580805:23 BC069431:35 AK313631:35 BC074879:60 BC074880:60 EU446889:105 AB464604:107 CU686806:108 AB451404:109 LF213686:161 MA449263:161 LF345227:-269 MA580804:-269 LF345229:459 MA580806:459 |
TATA-Box annotation
| Distance to TSS: | 1170 |
|---|---|
| Nearest PromoterID: | NM_001206 |
| Entrez ID: | 687 |
| Nearest Unigene: | Hs.150557 |
| Nearest Refseq: | NM_001206 |
| Nearest Ensembl: | ENSG00000119138 |
| Gene Name: | KLF9 |
| Gene Alias: | BTEB|BTEB1 |
| Gene Description: | Kruppel like factor 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.175 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
