Difference between revisions of "TSS:Hg 101007.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=286038 |entrez_id=301 |gc_percent=0.303483 |gene_alias=ANX1|LPC1 |gene_description=annexin A1 |gene_name=ANXA1 |gene_type=protein-c...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |LPC1= | ||
| + | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=285904 | ||
| + | |end=73437785 | ||
| + | |end_of_center_position=73437769 | ||
|entrez_id=301 | |entrez_id=301 | ||
|gc_percent=0.303483 | |gc_percent=0.303483 | ||
| − | |gene_alias=ANX1 | + | |gene_alias=ANX1{{!}}LPC1 |
|gene_description=annexin A1 | |gene_description=annexin A1 | ||
|gene_name=ANXA1 | |gene_name=ANXA1 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_000700 | |nearest_refseq=NM_000700 | ||
|nearest_unigene=Hs.494173 | |nearest_unigene=Hs.494173 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=73437752 | ||
| + | |start_of_center_position=73437768 | ||
| + | |strand=- | ||
| + | |tata_box=-20(TCTTTTTAAAGG,-,0.00),-19(CTTTTTAAAGGA,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_101007.1 | |tss_id=hg_101007.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:30, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 73437768 |
|---|---|
| End of the center position in the TSS region: | 73437769 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 285904 |
|---|---|
| Nearest PromoterID: | NM_000700 |
| Entrez ID: | 301 |
| Nearest Unigene: | Hs.494173 |
| Nearest Refseq: | NM_000700 |
| Nearest Ensembl: | ENSG00000135046 |
| Gene Name: | ANXA1 |
| Gene Alias: | ANX1|LPC1 |
| Gene Description: | annexin A1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.303483 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -20(TCTTTTTAAAGG,-,0.00),-19(CTTTTTAAAGGA,+,0.00) |
