Difference between revisions of "TSS:Hg 101061.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 5: | Line 5: | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=1345 | |distance_to_tss=1345 | ||
|end=76904748 | |end=76904748 | ||
| + | |end_of_center_position=76904743 | ||
|entrez_id=158471 | |entrez_id=158471 | ||
|gc_percent=0.378109 | |gc_percent=0.378109 | ||
| − | |gene_alias=BMCC1 | + | |gene_alias=BMCC1{{!}}BNIPXL{{!}}C9orf65{{!}}KIAA0367 |
| − | |gene_description=prune homolog 2 | + | |gene_description=prune homolog 2 with BCH domain |
|gene_name=PRUNE2 | |gene_name=PRUNE2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000106772 | |nearest_ensembl=ENSG00000106772 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_131751 |
|nearest_refseq=NM_015225 | |nearest_refseq=NM_015225 | ||
|nearest_unigene=Hs.262857 | |nearest_unigene=Hs.262857 | ||
| Line 21: | Line 22: | ||
|species=human | |species=human | ||
|start=76904736 | |start=76904736 | ||
| + | |start_of_center_position=76904742 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=85(CCTTTTATAGTT,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:31, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 76904742 |
|---|---|
| End of the center position in the TSS region: | 76904743 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 1345 |
|---|---|
| Nearest PromoterID: | NR_131751 |
| Entrez ID: | 158471 |
| Nearest Unigene: | Hs.262857 |
| Nearest Refseq: | NM_015225 |
| Nearest Ensembl: | ENSG00000106772 |
| Gene Name: | PRUNE2 |
| Gene Alias: | BMCC1|BNIPXL|C9orf65|KIAA0367 |
| Gene Description: | prune homolog 2 with BCH domain |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.378109 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 85(CCTTTTATAGTT,+,0.00) |
