Difference between revisions of "TSS:Hg 101119.1"
From referenceTSS
| Line 2: | Line 2: | ||
|ESG1= | |ESG1= | ||
|GRG1= | |GRG1= | ||
| − | |all_trans=AK304565:0 BC015747:-28 AK293606:32 AK290860:58 ENST00000418319.5:-85 | + | |all_trans=AK304565:0 BC015747:-28 AK293606:32 AK290860:58 ENST00000418319.5:-85 M99435:89 KJ892282:115 KJ897678:115 DQ893273:115 DQ896604:115 EU831620:115 AB590200:115 EU831706:115 CU677419:115 CU679619:115 LF355191:-156 MA590768:-156 BC010100:-318 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| Line 11: | Line 11: | ||
|entrez_id=7088 | |entrez_id=7088 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
| − | |gene_alias=ESG | + | |gene_alias=ESG{{!}}ESG1{{!}}GRG1 |
| − | |gene_description= | + | |gene_description=TLE family member 1, transcriptional corepressor |
|gene_id=7088 | |gene_id=7088 | ||
| − | |gene_name= | + | |gene_name=TLE family member 1, transcriptional corepressor |
|gene_source=HGNC:11837 | |gene_source=HGNC:11837 | ||
|gene_symbol=TLE1 | |gene_symbol=TLE1 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:11837 | |hgnc_mgi_id=HGNC:11837 | ||
|nearest_ensembl=ENSG00000196781 | |nearest_ensembl=ENSG00000196781 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001303103 |
|nearest_refseq=NM_005077 | |nearest_refseq=NM_005077 | ||
|nearest_unigene=Hs.197320 | |nearest_unigene=Hs.197320 | ||
| − | |num_trans= | + | |num_trans=18 |
|species=human | |species=human | ||
|start=81688354 | |start=81688354 | ||
Revision as of 16:32, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 81688358 |
|---|---|
| End of the center position in the TSS region: | 81688359 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK304565 |
|---|---|
| Distance: | 0 |
| Num_trans: | 18 |
| All_trans: | AK304565:0 BC015747:-28 AK293606:32 AK290860:58 ENST00000418319.5:-85 M99435:89 KJ892282:115 KJ897678:115 DQ893273:115 DQ896604:115 EU831620:115 AB590200:115 EU831706:115 CU677419:115 CU679619:115 LF355191:-156 MA590768:-156 BC010100:-318 |
TATA-Box annotation
| Distance to TSS: | 1176 |
|---|---|
| Nearest PromoterID: | NM_001303103 |
| Entrez ID: | 7088 |
| Nearest Unigene: | Hs.197320 |
| Nearest Refseq: | NM_005077 |
| Nearest Ensembl: | ENSG00000196781 |
| Gene Name: | TLE family member 1, transcriptional corepressor |
| Gene Alias: | ESG|ESG1|GRG1 |
| Gene Description: | TLE family member 1, transcriptional corepressor |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
