Difference between revisions of "TSS:Hg 10113.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=877 |entrez_id=473 |gc_percent=0.378109 |gene_alias=ARG|ARP|ATN1L|DNB1|NEDBEH |gene_description=arginine-glutamic acid dipeptid...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ARP= | ||
| + | |ATN1L= | ||
| + | |DNB1= | ||
| + | |NEDBEH= | ||
| + | |chr=chr1 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=1022 | ||
| + | |end=8422819 | ||
| + | |end_of_center_position=8422811 | ||
|entrez_id=473 | |entrez_id=473 | ||
|gc_percent=0.378109 | |gc_percent=0.378109 | ||
| − | |gene_alias=ARG | + | |gene_alias=ARG{{!}}ARP{{!}}ATN1L{{!}}DNB1{{!}}NEDBEH |
|gene_description=arginine-glutamic acid dipeptide repeats | |gene_description=arginine-glutamic acid dipeptide repeats | ||
|gene_name=RERE | |gene_name=RERE | ||
| Line 12: | Line 20: | ||
|nearest_refseq=NM_012102 | |nearest_refseq=NM_012102 | ||
|nearest_unigene=Hs.463041 | |nearest_unigene=Hs.463041 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=8422801 | ||
| + | |start_of_center_position=8422810 | ||
| + | |strand=- | ||
| + | |transcript_name= | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10113.1 | |tss_id=hg_10113.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:32, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 8422810 |
|---|---|
| End of the center position in the TSS region: | 8422811 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 1022 |
|---|---|
| Nearest PromoterID: | NM_001042682 |
| Entrez ID: | 473 |
| Nearest Unigene: | Hs.463041 |
| Nearest Refseq: | NM_012102 |
| Nearest Ensembl: | ENSG00000142599 |
| Gene Name: | RERE |
| Gene Alias: | ARG|ARP|ATN1L|DNB1|NEDBEH |
| Gene Description: | arginine-glutamic acid dipeptide repeats |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.378109 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
