Difference between revisions of "TSS:Hg 101140.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=LF331812:-77 MA567389:-77 LF331813:-262 MA567390:-262 LF331811:441 MA567388:441 | ||
|bA522I20.2= | |bA522I20.2= | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=-77 |
| − | |distance_to_tss= | + | |distance_to_tss=37518 |
|end=83660662 | |end=83660662 | ||
|end_of_center_position=83660661 | |end_of_center_position=83660661 | ||
|entrez_id=414328 | |entrez_id=414328 | ||
|gc_percent=0.432836 | |gc_percent=0.432836 | ||
| − | |gene_alias=C9orf103 | + | |gene_alias=C9orf103{{!}}bA522I20.2{{!}}hGntK |
| − | |gene_description= | + | |gene_description=IDNK gluconokinase |
|gene_name=IDNK | |gene_name=IDNK | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hGntK= | |hGntK= | ||
|nearest_ensembl=ENSG00000148057 | |nearest_ensembl=ENSG00000148057 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_046422 |
|nearest_refseq=NM_001001551 | |nearest_refseq=NM_001001551 | ||
|nearest_unigene=Hs.530261 | |nearest_unigene=Hs.530261 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=83660659 | |start=83660659 | ||
|start_of_center_position=83660660 | |start_of_center_position=83660660 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF331812 MA567389 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_101140.1 | |tss_id=hg_101140.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:33, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 83660660 |
|---|---|
| End of the center position in the TSS region: | 83660661 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF331812 MA567389 |
|---|---|
| Distance: | -77 |
| Num_trans: | 6 |
| All_trans: | LF331812:-77 MA567389:-77 LF331813:-262 MA567390:-262 LF331811:441 MA567388:441 |
TATA-Box annotation
| Distance to TSS: | 37518 |
|---|---|
| Nearest PromoterID: | NR_046422 |
| Entrez ID: | 414328 |
| Nearest Unigene: | Hs.530261 |
| Nearest Refseq: | NM_001001551 |
| Nearest Ensembl: | ENSG00000148057 |
| Gene Name: | IDNK |
| Gene Alias: | C9orf103|bA522I20.2|hGntK |
| Gene Description: | IDNK gluconokinase |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.432836 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
