Difference between revisions of "TSS:Hg 101147.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=LF331818:48 MA567395:48 LF331817:150 MA567394:150 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=48 |
|distance_to_tss=-27812 | |distance_to_tss=-27812 | ||
|end=83680036 | |end=83680036 | ||
| + | |end_of_center_position=83680024 | ||
|entrez_id=105376114 | |entrez_id=105376114 | ||
|gc_percent=0.38806 | |gc_percent=0.38806 | ||
| Line 15: | Line 17: | ||
|nearest_refseq=NR_135839 | |nearest_refseq=NR_135839 | ||
|nearest_unigene=Hs.9589 | |nearest_unigene=Hs.9589 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=83680010 | |start=83680010 | ||
| + | |start_of_center_position=83680023 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF331818 MA567395 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_101147.1 | |tss_id=hg_101147.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:33, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 83680023 |
|---|---|
| End of the center position in the TSS region: | 83680024 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | LF331818 MA567395 |
|---|---|
| Distance: | 48 |
| Num_trans: | 4 |
| All_trans: | LF331818:48 MA567395:48 LF331817:150 MA567394:150 |
TATA-Box annotation
| Distance to TSS: | -27812 |
|---|---|
| Nearest PromoterID: | NR_135839 |
| Entrez ID: | 105376114 |
| Nearest Unigene: | Hs.9589 |
| Nearest Refseq: | NR_135839 |
| Nearest Ensembl: | ENSG00000254473 |
| Gene Name: | LOC105376114 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC105376114 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.38806 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
