Difference between revisions of "TSS:Hg 101158.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=NM_001271927:-5 NM_001271928:-5 ENST00000334204.6:41 ENST00000413982.5:41 ENST00000297814.7:74 NM_001354069:74 NM_001354070:74 NM_001354071:74 NM_017576:74 AY237536:79 AY237537:79 AY237538:79 BC140788:80 AK297689:84 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| − | |distance= | + | |distance=-5 |
| − | |distance_to_tss= | + | |distance_to_tss=22 |
|end=83921539 | |end=83921539 | ||
|end_of_center_position=83921523 | |end_of_center_position=83921523 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:18632 | |hgnc_mgi_id=HGNC:18632 | ||
|nearest_ensembl=ENSG00000165115 | |nearest_ensembl=ENSG00000165115 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001271927 |
|nearest_refseq=NM_017576 | |nearest_refseq=NM_017576 | ||
|nearest_unigene=Hs.697514 | |nearest_unigene=Hs.697514 | ||
| Line 27: | Line 27: | ||
|start_of_center_position=83921522 | |start_of_center_position=83921522 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=NM_001271927 NM_001271928 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101158.1 | |tss_id=hg_101158.1 | ||
Revision as of 16:33, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 83921522 |
|---|---|
| End of the center position in the TSS region: | 83921523 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001271927 NM_001271928 |
|---|---|
| Distance: | -5 |
| Num_trans: | 14 |
| All_trans: | NM_001271927:-5 NM_001271928:-5 ENST00000334204.6:41 ENST00000413982.5:41 ENST00000297814.7:74 NM_001354069:74 NM_001354070:74 NM_001354071:74 NM_017576:74 AY237536:79 AY237537:79 AY237538:79 BC140788:80 AK297689:84 |
TATA-Box annotation
| Distance to TSS: | 22 |
|---|---|
| Nearest PromoterID: | NM_001271927 |
| Entrez ID: | 55582 |
| Nearest Unigene: | Hs.697514 |
| Nearest Refseq: | NM_017576 |
| Nearest Ensembl: | ENSG00000165115 |
| Gene Name: | kinesin family member 27 |
| Gene Alias: | - |
| Gene Description: | kinesin family member 27 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
