Difference between revisions of "TSS:Hg 101173.1"
From referenceTSS
| Line 2: | Line 2: | ||
|C9orf76= | |C9orf76= | ||
|FAAP75= | |FAAP75= | ||
| − | |all_trans=BC014980:-2 ENST00000483135 | + | |all_trans=BC014980:-2 ENST00000483135.1:-9 ENST00000376281.8:-18 X72727:-18 AK291336:-18 ENST00000472778.5:-30 NM_031262:-196 NM_002140:-196 NM_001318188:311 NM_001318187:311 NM_001318186:311 ENST00000360384.9:332 AK294067:338 AK307962:366 ENST00000376263.8:367 NM_031263:367 AK300744:368 AK096385:374 AB209562:380 ENST00000457156.5:392 BC025321:392 BC000355:415 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
|distance=-2 | |distance=-2 | ||
| − | |distance_to_tss= | + | |distance_to_tss=198 |
|end=83980586 | |end=83980586 | ||
|end_of_center_position=83980584 | |end_of_center_position=83980584 | ||
| − | |entrez_id= | + | |entrez_id=3190 |
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
| − | |gene_alias= | + | |gene_alias=AUKS{{!}}CSBP{{!}}HNRPK{{!}}TUNP |
| − | |gene_description= | + | |gene_description=heterogeneous nuclear ribonucleoprotein K |
|gene_id=3190 | |gene_id=3190 | ||
|gene_name=heterogeneous nuclear ribonucleoprotein K | |gene_name=heterogeneous nuclear ribonucleoprotein K | ||
| Line 20: | Line 20: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:5044 | |hgnc_mgi_id=HGNC:5044 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000165119 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_031262 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_002140 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.522257 |
| − | |num_trans= | + | |num_trans=22 |
|species=human | |species=human | ||
|start=83980581 | |start=83980581 | ||
Revision as of 16:33, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 83980583 |
|---|---|
| End of the center position in the TSS region: | 83980584 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC014980 |
|---|---|
| Distance: | -2 |
| Num_trans: | 22 |
| All_trans: | BC014980:-2 ENST00000483135.1:-9 ENST00000376281.8:-18 X72727:-18 AK291336:-18 ENST00000472778.5:-30 NM_031262:-196 NM_002140:-196 NM_001318188:311 NM_001318187:311 NM_001318186:311 ENST00000360384.9:332 AK294067:338 AK307962:366 ENST00000376263.8:367 NM_031263:367 AK300744:368 AK096385:374 AB209562:380 ENST00000457156.5:392 BC025321:392 BC000355:415 |
TATA-Box annotation
| Distance to TSS: | 198 |
|---|---|
| Nearest PromoterID: | NM_031262 |
| Entrez ID: | 3190 |
| Nearest Unigene: | Hs.522257 |
| Nearest Refseq: | NM_002140 |
| Nearest Ensembl: | ENSG00000165119 |
| Gene Name: | heterogeneous nuclear ribonucleoprotein K |
| Gene Alias: | AUKS|CSBP|HNRPK|TUNP |
| Gene Description: | heterogeneous nuclear ribonucleoprotein K |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
