Difference between revisions of "TSS:Hg 101209.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|ISA1= | |ISA1= | ||
| − | |all_trans=ENST00000311534.6 | + | |all_trans=ENST00000311534.6:-10 AB528754:-360 AM393721:-360 BC053900:-397 BC071621:-411 AY015642:-412 AL834356:-422 BC002675:-431 AF284752:-431 ENST00000375991.9:-440 ENST00000326094.4:-440 NM_030940:-440 AK309289:-440 AK225937:-440 AK055643:-440 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
|distance=-10 | |distance=-10 | ||
| − | |distance_to_tss= | + | |distance_to_tss=458 |
|end=86282098 | |end=86282098 | ||
|end_of_center_position=86282081 | |end_of_center_position=86282081 | ||
|entrez_id=81689 | |entrez_id=81689 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
| − | |gene_alias=HBLD2 | + | |gene_alias=HBLD2{{!}}ISA1{{!}}MMDS5{{!}}hIscA |
|gene_description=iron-sulfur cluster assembly 1 | |gene_description=iron-sulfur cluster assembly 1 | ||
|gene_id=81689 | |gene_id=81689 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_030940 | |nearest_refseq=NM_030940 | ||
|nearest_unigene=Hs.449291 | |nearest_unigene=Hs.449291 | ||
| − | |num_trans= | + | |num_trans=15 |
|species=human | |species=human | ||
|start=86282062 | |start=86282062 | ||
|start_of_center_position=86282080 | |start_of_center_position=86282080 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000311534.6 | + | |transcript_name=ENST00000311534.6 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101209.1 | |tss_id=hg_101209.1 | ||
Revision as of 16:34, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 86282080 |
|---|---|
| End of the center position in the TSS region: | 86282081 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000311534.6 |
|---|---|
| Distance: | -10 |
| Num_trans: | 15 |
| All_trans: | ENST00000311534.6:-10 AB528754:-360 AM393721:-360 BC053900:-397 BC071621:-411 AY015642:-412 AL834356:-422 BC002675:-431 AF284752:-431 ENST00000375991.9:-440 ENST00000326094.4:-440 NM_030940:-440 AK309289:-440 AK225937:-440 AK055643:-440 |
TATA-Box annotation
| Distance to TSS: | 458 |
|---|---|
| Nearest PromoterID: | NM_030940 |
| Entrez ID: | 81689 |
| Nearest Unigene: | Hs.449291 |
| Nearest Refseq: | NM_030940 |
| Nearest Ensembl: | ENSG00000135070 |
| Gene Name: | iron-sulfur cluster assembly 1 |
| Gene Alias: | HBLD2|ISA1|MMDS5|hIscA |
| Gene Description: | iron-sulfur cluster assembly 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
