Difference between revisions of "TSS:Hg 101216.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|TUT7= | |TUT7= | ||
| − | |all_trans=AK308352:-39 BC032456:-91 ENST00000277141.10:-107 | + | |all_trans=AK308352:-39 BC032456:-91 ENST00000277141.10:-107 ENST00000375963.8:-107 NM_001185059:-107 NM_001185074:-107 NM_001330718:-107 NM_024617:-107 AL832193:-107 CR936608:-107 AK055546:-109 CR933644:-111 ENST00000375960.6:-151 AL832026:-151 CR933643:-160 BX641077:-160 BC111003:-171 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
|distance=-39 | |distance=-39 | ||
| − | |distance_to_tss= | + | |distance_to_tss=112 |
|end=86354303 | |end=86354303 | ||
|end_of_center_position=86354298 | |end_of_center_position=86354298 | ||
|entrez_id=79670 | |entrez_id=79670 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
| − | |gene_alias=PAPD6 | + | |gene_alias=PAPD6{{!}}TENT3B{{!}}ZCCHC6 |
| − | |gene_description= | + | |gene_description=terminal uridylyl transferase 7 |
|gene_id=79670 | |gene_id=79670 | ||
| − | |gene_name= | + | |gene_name=terminal uridylyl transferase 7 |
|gene_source=HGNC:25817 | |gene_source=HGNC:25817 | ||
| − | |gene_symbol= | + | |gene_symbol=TUT7 |
| − | |gene_synonyms=FLJ13409 KIAA1711 PAPD6 | + | |gene_synonyms=FLJ13409 KIAA1711 PAPD6 TENT3B |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:25817 | |hgnc_mgi_id=HGNC:25817 | ||
|nearest_ensembl=ENSG00000083223 | |nearest_ensembl=ENSG00000083223 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001185059 |
|nearest_refseq=NM_024617 | |nearest_refseq=NM_024617 | ||
|nearest_unigene=Hs.597057 | |nearest_unigene=Hs.597057 | ||
| − | |num_trans= | + | |num_trans=17 |
|species=human | |species=human | ||
|start=86354292 | |start=86354292 | ||
Revision as of 16:34, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 86354297 |
|---|---|
| End of the center position in the TSS region: | 86354298 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK308352 |
|---|---|
| Distance: | -39 |
| Num_trans: | 17 |
| All_trans: | AK308352:-39 BC032456:-91 ENST00000277141.10:-107 ENST00000375963.8:-107 NM_001185059:-107 NM_001185074:-107 NM_001330718:-107 NM_024617:-107 AL832193:-107 CR936608:-107 AK055546:-109 CR933644:-111 ENST00000375960.6:-151 AL832026:-151 CR933643:-160 BX641077:-160 BC111003:-171 |
TATA-Box annotation
| Distance to TSS: | 112 |
|---|---|
| Nearest PromoterID: | NM_001185059 |
| Entrez ID: | 79670 |
| Nearest Unigene: | Hs.597057 |
| Nearest Refseq: | NM_024617 |
| Nearest Ensembl: | ENSG00000083223 |
| Gene Name: | terminal uridylyl transferase 7 |
| Gene Alias: | PAPD6|TENT3B|ZCCHC6 |
| Gene Description: | terminal uridylyl transferase 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
